RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ZNF502Q8TBZ5 544 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 NHP2Q9NX24 153 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 U3KQK5 164 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 TRAV8-1A0A0A6YYK1 113 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 LOC389332A0A1B0GUA5 103 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 H3BMG7 143 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 MAGEA5P43359 124 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 ATP5G2Q06055 141 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 C3AR1Q16581 482 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 SRSF12Q8WXF0 261 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 IGLL5B9A064 214 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 D6R8Y8 96 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 IGLV2-11P01706 119 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 C5orf64Q2M2E5 130 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 INO80CQ6PI98 192 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 DKK2Q9UBU2 259 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 DSPP15924 2871 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 NAV3Q8IVL0 2385 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 TECTAO75443 2155 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 KALRNO60229 2985 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 IGKV2D-26A0A0A0MRZ7 120 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 ZNF785A8K8V0 405 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 VSTM5A8MXK1 200 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 SLC25A17O43808 307 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 TSPAN13O95857 204 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 ORM2P19652 201 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 CFAP161Q6P656 301 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 CEND1Q8N111 149 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 ZCCHC24Q8N2G6 241 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 TTC9CQ8N5M4 171 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 ZNRF1Q8ND25 227 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 ZNF418Q8TF45 676 aaPredicted RBP6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 ZNF479Q96JC4 524 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 MRPL36Q9P0J6 103 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 PRO0461Q9UI25 63 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 HEATR1Q9H583 2144 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 SRRM5B3KS81 715 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 SHISA9B4DS77 424 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 TIMM8AO60220 97 aaPredicted RBP6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 NDUFS7O75251 213 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 IGHV3-48P01763 117 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 CCL4P13236 92 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 HOXB4P17483 251 aaPredicted RBP6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 INSL3P51460 131 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 Q6AWC8 147 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 RAB9BQ9NP90 201 aa6.4□□□□□ -1.38
HMGXB4-202ENST00000418170 DMXL2Q8TDJ6 3036 aa6.4□□□□□ -1.39
HMGXB4-202ENST00000418170 GAGE13Q4V321 117 aa6.4□□□□□ -1.39
HMGXB4-202ENST00000418170 Q71RC1 249 aaPredicted RBP6.4□□□□□ -1.39
HMGXB4-202ENST00000418170 RITA1Q96K30 269 aa6.4□□□□□ -1.39
HMGXB4-202ENST00000418170 PRELID3AQ96N28 172 aa6.4□□□□□ -1.39
HMGXB4-202ENST00000418170 TRBV25-1A0A075B6N4 114 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 TRBV6-1A0A0K0K1D8 114 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 WI2-2373I1.2A0A1W2PRP0 233 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 hADV38S2A0JD32 116 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 A6NJY4 79 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 FXYD7P58549 80 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 SRSF1Q07955 248 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 PRNTQ86SH4 94 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 ORMDL3Q8N138 153 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 HHLA3Q9XRX5 114 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 E7EUB6 86 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 H3BTX0 84 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 WT1-ASQ06250 92 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 C8orf86Q6ZUL3 223 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 FLYWCH2Q96CP2 140 aaKnown RBP6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 TTTY12Q9BZ98 90 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 ZMAT4Q9H898 229 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 LINC00312Q9Y6C7 94 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 C16orf97H3BN30 126 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 HES7Q9BYE0 225 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 TTTY13Q9BZ97 58 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 OTORQ9NRC9 128 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 AKAP13Q12802 2813 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 OR11H12B2RN74 326 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 OR11H1Q8NG94 326 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 OR11H2Q8NH07 326 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
HMGXB4-202ENST00000418170 IGHV3OR15-7A0A075B7D8 119 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 SUB1P53999 127 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 FAM104BQ5XKR9 115 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 GOLT1AQ6ZVE7 132 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 OSR1Q8TAX0 266 aaPredicted RBP6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 RND1Q92730 232 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 FZR1Q9UM11 496 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 SSUH2Q9Y2M2 353 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 DSCAMO60469 2012 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 CGB1A6NKQ9 187 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 AMTNQ6UX39 209 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 ZNF562Q6V9R5 426 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 CYSLTR1Q9Y271 337 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 IGHV1-2P23083 117 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 KLRD1Q13241 179 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 SRSF6Q13247 344 aaKnown RBP6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 ODF1Q14990 250 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 AMN1Q8IY45 258 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 HARBI1Q96MB7 349 aa6.38□□□□□ -1.39
HMGXB4-202ENST00000418170 SERTM2A0A1B0GWG4 89 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 NPIPB5A8MRT5 1133 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms