RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 KRTAP1-5Q9BYS1 174 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 KCNIP3Q9Y2W7 256 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 HLA-DRB4X5D2U9 266 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
LINC01238-201ENST00000416204 C5orf51A6NDU8 294 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 CRYM-AS1A6NIL9 109 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 F6UB75 175 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 GPR31O00270 319 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 CLN5O75503 358 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 B3GALNT1O75752 331 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 PET100P0DJ07 73 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 DEFB130BP0DP73 79 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 DEFB130AP0DP74 79 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 AP2S1P53680 142 aaPredicted RBP6.56□□□□□ -1.36
LINC01238-201ENST00000416204 SUPT4H1P63272 117 aaKnown RBP6.56□□□□□ -1.36
LINC01238-201ENST00000416204 ACOT7LQ6ZUV0 252 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 TBC1D26Q86UD7 250 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 CMTM1Q8IZ96 169 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 C1orf158Q8N1D5 194 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 KCNRGQ8N5I3 272 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 SLC35G3Q8N808 338 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 ZNF709Q8N972 641 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 CCDC71LQ8N9Z2 235 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 PPP1R1CQ8WVI7 109 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 C2orf50Q96LR7 162 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 ARL6Q9H0F7 186 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 TNFSF18Q9UNG2 199 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 LINC00588Q9Y4M8 146 aa6.56□□□□□ -1.36
LINC01238-201ENST00000416204 KANTRA0A1W2PQU2 76 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 SMIM9A6NGZ8 99 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 FAM25EA8MYX2 175 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 F5H768 121 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 HBE1P02100 147 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 RNASE2P10153 161 aaKnown RBP6.55□□□□□ -1.36
LINC01238-201ENST00000416204 HOXA1P49639 335 aaPredicted RBP6.55□□□□□ -1.36
LINC01238-201ENST00000416204 SRPXP78539 464 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 USF2Q15853 346 aaPredicted RBP6.55□□□□□ -1.36
LINC01238-201ENST00000416204 Q5VSD8 79 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 LRTM2Q8N967 370 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 C15orf53Q8NAA6 179 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 INO80EQ8NBZ0 244 aaPredicted RBP6.55□□□□□ -1.36
LINC01238-201ENST00000416204 PHYHIPLQ96FC7 376 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 UHRF2Q96PU4 802 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 NRN1Q9NPD7 142 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 MED9Q9NWA0 146 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 MDFICQ9P1T7 246 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 U3KQE9 123 aa6.55□□□□□ -1.36
LINC01238-201ENST00000416204 TEX13DA0A0J9YY54 714 aaPredicted RBP6.54□□□□□ -1.36
LINC01238-201ENST00000416204 ZNF705GA8MUZ8 300 aaPredicted RBP6.54□□□□□ -1.36
LINC01238-201ENST00000416204 CCSO14618 274 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 BCL2L11O43521 198 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 SMR3BP02814 79 aaPredicted RBP6.54□□□□□ -1.36
LINC01238-201ENST00000416204 IL4P05112 153 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 NUP62P37198 522 aaPredicted RBP6.54□□□□□ -1.36
LINC01238-201ENST00000416204 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
LINC01238-201ENST00000416204 RND3P61587 244 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 HAMPP81172 84 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 PRSS54Q6PEW0 395 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 SIGLEC15Q6ZMC9 328 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 SSX7Q7RTT5 188 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 OR4X1Q8NH49 305 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 NAA60Q9H7X0 242 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 GOLT1BQ9Y3E0 138 aa6.54□□□□□ -1.36
LINC01238-201ENST00000416204 TEX48A0A1B0GUV7 120 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 DUXBA0A1W2PPF3 345 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 CFDP00746 253 aaPredicted RBP6.53□□□□□ -1.36
LINC01238-201ENST00000416204 IGKV1-5P01602 117 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 S100GP29377 79 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 OR10J1P30954 320 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 RND2P52198 227 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 CCL18P55774 89 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 PIGPP57054 158 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 IL15RAQ13261 267 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 RRN3P1Q2M238 152 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 FAM78BQ5VT40 261 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 LGI3Q8N145 548 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 ARPC5LQ9BPX5 153 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 TMEM208Q9BTX3 173 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 MAGT1Q9H0U3 335 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 SLC25A32Q9H2D1 315 aa6.53□□□□□ -1.36
LINC01238-201ENST00000416204 SAV1Q9H4B6 383 aaPredicted RBP6.53□□□□□ -1.36
LINC01238-201ENST00000416204 RNF222A6NCQ9 220 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 TAAR5O14804 337 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 RLN2P04090 185 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 IGLC1P0CG04 106 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 PI3P19957 117 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 NKX2-1P43699 371 aaPredicted RBP6.52□□□□□ -1.37
LINC01238-201ENST00000416204 SUB1P53999 127 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC01238-201ENST00000416204 XGP55808 180 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 EIF5AP63241 154 aaKnown RBP6.52□□□□□ -1.37
LINC01238-201ENST00000416204 CLINT1Q14677 625 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 SMCO1Q147U7 214 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 STOML3Q8TAV4 291 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 LRRC20Q8TCA0 184 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 Q8WTZ3 238 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 RNF141Q8WVD5 230 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 C18orf15Q96N68 181 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 PBDC1Q9BVG4 233 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 Q9H8V8 135 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 ENY2Q9NPA8 101 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms