RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 TMEM8BA6NDV4 472 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 TSPAN13O95857 204 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 OVOL1O14753 267 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 NTF4P34130 210 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 FOXL1Q12952 345 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 MSMBP08118 114 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 CFHR3Q02985 330 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 TRAV8-1A0A0A6YYK1 113 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 LINC00614P0C842 121 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 NIT1Q86X76 327 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 CARHSP1Q9Y2V2 147 aaKnown RBP8.65□□□□□ -1.02
COL12A1-203ENST00000416123 LCN12Q6JVE5 192 aa8.65□□□□□ -1.02
COL12A1-203ENST00000416123 HOXA3O43365 443 aaPredicted RBP8.65□□□□□ -1.02
COL12A1-203ENST00000416123 PRB1P04280 392 aa8.65□□□□□ -1.03
COL12A1-203ENST00000416123 PRADC1Q9BSG0 188 aa8.65□□□□□ -1.03
COL12A1-203ENST00000416123 FAM209BQ5JX69 171 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 PEF1Q9UBV8 284 aaKnown RBP8.64□□□□□ -1.03
COL12A1-203ENST00000416123 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
COL12A1-203ENST00000416123 A0A1B0GWJ7 208 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 CDK2AP2O75956 126 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 TCRAP04437 139 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 A0A1W2PRE2 83 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 RNF182Q8N6D2 247 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 A0A087WWC5 75 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 A0A1B0GW15 77 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 PRSS33Q8NF86 280 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 NRN1Q9NPD7 142 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 COTL1Q14019 142 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
COL12A1-203ENST00000416123 RBMY1BA6NDE4 496 aaKnown RBP8.63□□□□□ -1.03
COL12A1-203ENST00000416123 RBMY1EA6NEQ0 496 aaKnown RBP8.63□□□□□ -1.03
COL12A1-203ENST00000416123 RBMY1DP0C7P1 496 aaKnown RBP8.63□□□□□ -1.03
COL12A1-203ENST00000416123 RBMY1A1P0DJD3 496 aaKnown RBP8.63□□□□□ -1.03
COL12A1-203ENST00000416123 RBMY1CP0DJD4 496 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 DMRTC2Q8IXT2 367 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-203ENST00000416123 A8MXK9 166 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 TRGV9Q99603 122 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 PHLDA1Q8WV24 401 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-203ENST00000416123 PSCAO43653 123 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 SLC25A16P16260 332 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 CYSLTR1Q9Y271 337 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 MED13LQ71F56 2210 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 SH2D1AO60880 128 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 PLA2G2CQ5R387 149 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 DTX2Q86UW9 622 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 LHFPL1Q86WI0 220 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 F2Z2F3 143 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 C1orf122Q6ZSJ8 110 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 A0A0G2JRQ6 117 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 QRFPP83859 136 aa8.63□□□□□ -1.03
COL12A1-203ENST00000416123 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-203ENST00000416123 ZNF503-AS2A6NEH8 195 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 SPSB3Q6PJ21 355 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 A0A087WWL8 130 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 D6R8Y8 96 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 ATP6V0E1O15342 81 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 LYZL1Q6UWQ5 148 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 FAM223BA6NKX1 122 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 K7ERU9 68 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 CKS1BP61024 79 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 FAM223AQ8IWN6 122 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 ZNF524Q96C55 264 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 A0A087WX48 190 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 DEFB130BP0DP73 79 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 DEFB130AP0DP74 79 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 GLRX5Q86SX6 157 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 TTC9CQ8N5M4 171 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 AGMATQ9BSE5 352 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 LINC00158P58513 81 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 DPM2O94777 84 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 ZNF138P52744 262 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 TMEM95Q3KNT9 176 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 USMG5Q96IX5 58 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 RHPN1-AS1Q9BWJ2 59 aa8.62□□□□□ -1.03
COL12A1-203ENST00000416123 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 NMSQ5H8A3 153 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 A0A1B0GV90 55 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 OVOL3O00110 214 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 HBDP02042 147 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 LAGE3Q14657 143 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 CD300EQ496F6 205 aaPredicted RBP8.61□□□□□ -1.03
COL12A1-203ENST00000416123 G3V318 75 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 TNFSF13O75888 250 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 TSKUQ8WUA8 353 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 MED12LQ86YW9 2145 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 MPZP25189 248 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 GATA4P43694 442 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 IGFBPL1Q8WX77 278 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 NCOA6Q14686 2063 aaPredicted RBP8.61□□□□□ -1.03
COL12A1-203ENST00000416123 TOMM40O96008 361 aa8.61□□□□□ -1.03
COL12A1-203ENST00000416123 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-203ENST00000416123 SLC25A20O43772 301 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 LINC00518Q8N0U6 118 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 PSG3Q16557 428 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 C14orf178Q8N769 122 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms