RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 OR2T8A6NH00 312 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 TAX1BP3O14907 124 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 TOX4O94842 621 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 RBP4P02753 201 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 GATD1Q8NB37 220 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 TIMM8BQ9Y5J9 83 aaPredicted RBP7.79□□□□□ -1.16
CD44-206ENST00000415148 INSIG2Q9Y5U4 225 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 SELENOKQ9Y6D0 94 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 IGHV1-3A0A0C4DH29 117 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 MUC21A0A0G2JKD1 596 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 MUC21A0A140T8X8 626 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 A0A1B0GW15 77 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 TEX22C9J3V5 150 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 SYS1-DBNDD2H3BUS1 97 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 K7EP13 123 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 OVOL3O00110 214 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 CHEK1O14757 476 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 LIPFP07098 398 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 PSG1P11464 419 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 COL8A1P27658 744 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 ANKRD39Q53RE8 183 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 MUC21Q5SSG8 566 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 Q86TA4 180 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 LYPD1Q8N2G4 141 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 SLC25A39Q9BZJ4 359 aaPredicted RBP7.78□□□□□ -1.16
CD44-206ENST00000415148 RALYQ9UKM9 306 aaKnown RBP7.78□□□□□ -1.16
CD44-206ENST00000415148 CBY3A6NI87 242 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 ZNF785A8K8V0 405 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 BUB1B-PAK6H3BSN5 160 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 I3L2K1 104 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 K7EM74 188 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 SNAI2O43623 268 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 NUDT3O95989 172 aa7.78□□□□□ -1.16
CD44-206ENST00000415148 MAP1BP46821 2468 aaKnown RBP7.78□□□□□ -1.16
CD44-206ENST00000415148 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.77□□□□□ -1.17
CD44-206ENST00000415148 IGHV3-72A0A0B4J1Y9 119 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 KLK10O43240 276 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 IGLV2-11P01706 119 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 APOHP02749 345 aaPredicted RBP7.77□□□□□ -1.17
CD44-206ENST00000415148 VAMP3Q15836 100 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 PET117Q6UWS5 81 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 CIARTQ8N365 385 aaPredicted RBP7.77□□□□□ -1.17
CD44-206ENST00000415148 TMEM75Q8N9X5 138 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 RASL11BQ9BPW5 248 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 TMEM191AQ9H0A3 160 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 DYNLRB1Q9NP97 96 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 DCHS2Q6V1P9 2916 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 A0A087X0K7 114 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 SHISA9B4DS77 424 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 K7EQM0 130 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 CSN3P07498 182 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 CNTFRP26992 372 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 APOBEC3AP31941 199 aaPredicted RBP7.77□□□□□ -1.17
CD44-206ENST00000415148 BVES-AS1Q5T3Y7 98 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 PRSS33Q8NF86 280 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 SCNM1Q9BWG6 230 aa7.77□□□□□ -1.17
CD44-206ENST00000415148 E7EQL1 145 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 NCR2O95944 276 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 CDKN1BP46527 198 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 LYZP61626 148 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 RIGQ13278 110 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 Q6AWC8 147 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 S100A7AQ86SG5 101 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 BPIFA4PQ86YQ2 179 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 MAP1LC3CQ9BXW4 147 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 MS4A6AQ9H2W1 248 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 HSPB8Q9UJY1 196 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 TRBV19A0A075B6N1 114 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 B9A039 149 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 TCTAP57738 103 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 SRSF12Q8WXF0 261 aaKnown RBP7.76□□□□□ -1.17
CD44-206ENST00000415148 PCNX1Q96RV3 2341 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 SHANK2-AS3Q9BTD1 123 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 TMUB1Q9BVT8 246 aa7.76□□□□□ -1.17
CD44-206ENST00000415148 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 HSBP1L1C9JCN9 74 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 LY6LH3BQJ8 138 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 FAM106CPP0CH98 169 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 FAM106AQ4KMX7 169 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 AMMECR1LQ6DCA0 310 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 GOLT1AQ6ZVE7 132 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 PRNTQ86SH4 94 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 SCRT2Q9NQ03 307 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 H3BRN7 92 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 IGKV1-17P01599 117 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 EXOC3-AS1Q8N2X6 119 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 RPEQ96AT9 228 aa7.75□□□□□ -1.17
CD44-206ENST00000415148 MUC6Q6W4X9 2439 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 TRAV30A0A087WSZ9 112 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 TRAV8-6A0A0B4J262 113 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 HLA-DRB1P01911 266 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 LDLRAD2Q5SZI1 272 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 GFRALQ6UXV0 394 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 ARL6IP6Q8N6S5 226 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 FBXL15Q9H469 300 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 LRBAP50851 2863 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 AKAP13Q12802 2813 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms