RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TMEM190Q8WZ59 177 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 RAX2Q96IS3 184 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 TRAV9-2A0A087WT02 112 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 LINC00869P0C866 280 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 SRD5A1P18405 259 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 DDTP30046 118 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 ATP5L2Q7Z4Y8 100 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 STPG3Q8N7X2 389 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 CYB561D1Q8N8Q1 229 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 MS4A6AQ9H2W1 248 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 YLPM1P49750 1951 aaKnown RBP6.94□□□□□ -1.3
SYNE1-211ENST00000413186 C15orf65H3BRN8 121 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 HAX1O00165 279 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 VENTXO95231 258 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 REG1AP05451 166 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 LINC00614P0C842 121 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 TRGC1P0CF51 173 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 GPX4P36969 197 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-211ENST00000413186 VDAC2P45880 294 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-211ENST00000413186 ZNF124Q15973 351 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 GAGE2AQ6NT46 116 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 LRRC75A-AS1Q8N1F1 130 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 OR9G4Q8NGQ1 327 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 EAF1Q96JC9 268 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-211ENST00000413186 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-211ENST00000413186 TUBA4BQ9H853 241 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 FBXL7Q9UJT9 491 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 SUMO2P61956 95 aaKnown RBP6.94□□□□□ -1.3
SYNE1-211ENST00000413186 C5orf64Q2M2E5 130 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 CR1LQ2VPA4 569 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 GATAD1Q8WUU5 269 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 C21orf62Q9NYP8 219 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 CTSZQ9UBR2 303 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 FOXI3A8MTJ6 420 aaPredicted RBP6.93□□□□□ -1.3
SYNE1-211ENST00000413186 OR9G9P0C7N8 305 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 TM4SF20Q53R12 229 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 RBPMS2Q6ZRY4 209 aaKnown RBP6.93□□□□□ -1.3
SYNE1-211ENST00000413186 BIVMQ86UB2 503 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 FUT9Q9Y231 359 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 FOXA2Q9Y261 457 aaPredicted RBP6.93□□□□□ -1.3
SYNE1-211ENST00000413186 EXPH5Q8NEV8 1989 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 ARHGAP21Q5T5U3 1957 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 A0A1B0GW64 132 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.93□□□□□ -1.3
SYNE1-211ENST00000413186 FSTL3O95633 263 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 CD24P25063 80 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 PAX2Q02962 417 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 NPIPB3Q92617 1050 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 ZNF137PP52743 207 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 NMSQ5H8A3 153 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 SMIM20Q8N5G0 67 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 GSN-AS1Q9NRJ2 163 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 TRAV8-6A0A0B4J262 113 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 PSMB11A5LHX3 300 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 GGTLC3B5MD39 225 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 C22orf46C9J442 243 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 ID1P41134 155 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 C22orf34Q6ZV56 151 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 WNT10AQ9GZT5 417 aa6.93□□□□□ -1.3
SYNE1-211ENST00000413186 IGHV4-61A0A0C4DH41 118 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 A0A0U1RQV1 116 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 NPIPB6E9PJ23 425 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 MALP21145 153 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 ANOS1P23352 680 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 SSBP2P81877 361 aaPredicted RBP6.92□□□□□ -1.3
SYNE1-211ENST00000413186 SH3BGRL3Q9H299 93 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 RPRMQ9NS64 109 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 PKD1L2Q7Z442 2459 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 LAMA5O15230 3695 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 MYO18BQ8IUG5 2567 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 IGHV4-30-2A0A087WSY4 118 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 A0A087WWC5 75 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 LINC00473A8K010 186 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 ZNF833PQ6ZTB9 187 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 SRSF8Q9BRL6 282 aaKnown RBP6.92□□□□□ -1.3
SYNE1-211ENST00000413186 HIVEP3Q5T1R4 2406 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 MST1LQ2TV78 715 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 SPRNQ5BIV9 151 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 TTC9CQ8N5M4 171 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
SYNE1-211ENST00000413186 GEMIN7Q9H840 131 aaKnown RBP6.92□□□□□ -1.3
SYNE1-211ENST00000413186 CYTL1Q9NRR1 136 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 RABAC1Q9UI14 185 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 TRAV1-1A0A0B4J248 108 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 C8orf88P0DMB2 117 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 PSG1P11464 419 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 NPCDR1Q9BY65 106 aa6.92□□□□□ -1.3
SYNE1-211ENST00000413186 EPG5Q9HCE0 2579 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 C5orf24Q7Z6I8 188 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 PAXXQ9BUH6 204 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 SIGLEC9Q9Y336 463 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 DSCAMO60469 2012 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 NPPCP23582 126 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 DLX6P56179 175 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 OR10J6PQ8NGY7 276 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 FAM157CP0CG43 387 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 CTAG1AP78358 180 aa6.91□□□□□ -1.3
SYNE1-211ENST00000413186 NDUFAF3Q9BU61 184 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms