RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 LINC00299Q6ZSB3 139 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 MITD1Q8WV92 249 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 LINC00052Q96N35 136 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 CCDC32Q9BV29 185 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 SAV1Q9H4B6 383 aaPredicted RBP8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 NBDYA0A0U1RRE5 68 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 H3BP45 60 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 WRBO00258 174 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 MED6O75586 246 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 PSMB3P49720 205 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 FXYD7P58549 80 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 POLR2GP62487 172 aaKnown RBP eCLIP8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 PSG9Q00887 426 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 C4orf46Q504U0 113 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 EBLN2Q6P2I7 272 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 THAP8Q8NA92 274 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 OR4B1Q8NGF8 309 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 COQ8AQ8NI60 647 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 SLC35E1Q96K37 410 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 CIB3Q96Q77 187 aaPredicted RBP8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 YTHDF2Q9Y5A9 579 aaKnown RBP8.69□□□□□ -1.02
APOBEC3B-204ENST00000407298 NACAE9PAV3 2078 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 PMS2P5A8MQ11 134 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 TCRBP04435 133 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 PAX9P55771 341 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 SAMD13Q5VXD3 122 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 OR51G1Q8NGK1 321 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 RNF125Q96EQ8 232 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 NUDT15Q9NV35 164 aa8.68□□□□□ -1.02
APOBEC3B-204ENST00000407298 TRAV6A0A075B6T7 132 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 ZFP92A6NM28 416 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 SSSCA1O60232 199 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 CCNKO75909 580 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 CCL18P55774 89 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 RAB11AP62491 216 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 SPANXN5Q5MJ07 72 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 C1orf194Q5T5A4 169 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 GDF5OSQ5U4N7 250 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 OR8G2PQ6IF36 304 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 ACOT7LQ6ZUV0 252 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 ZNF709Q8N972 641 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 ZBTB8BQ8NAP8 495 aaPredicted RBP8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 TRGV9Q99603 122 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 SEC22CQ9BRL7 303 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 TMEM208Q9BTX3 173 aa8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 PAIP2BQ9ULR5 123 aaKnown RBP8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 RCL1Q9Y2P8 373 aaKnown RBP8.67□□□□□ -1.02
APOBEC3B-204ENST00000407298 LYRM9A8MSI8 78 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 CCSO14618 274 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 FABP1P07148 127 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 B2MP61769 119 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 IFITM3Q01628 133 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 OR2F1Q13607 317 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 IAH1Q2TAA2 248 aaPredicted RBP8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 TMEM14EPQ6UXP3 125 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 TMEM182Q6ZP80 229 aaPredicted RBP8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 PTTG2Q9NZH5 202 aa8.66□□□□□ -1.02
APOBEC3B-204ENST00000407298 ISLRO14498 428 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 LYZP61626 148 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 ASAH1Q13510 395 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 FAM78BQ5VT40 261 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 S100ZQ8WXG8 99 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 SMIM8Q96KF7 97 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 PBDC1Q9BVG4 233 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 SLC35B3Q9H1N7 401 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 RPRMQ9NS64 109 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 STRAPQ9Y3F4 350 aaKnown RBP8.65□□□□□ -1.02
APOBEC3B-204ENST00000407298 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 NUDT3O95989 172 aa8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 MBPP02686 304 aaPredicted RBP8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 MEOX2P50222 304 aa8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 RPP30P78346 268 aaKnown RBP8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 ZNF431Q8TF32 576 aaPredicted RBP8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 IGF2BP2-AS1Q96M15 143 aa8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 C17orf77Q96MU5 243 aa8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 WDR12Q9GZL7 423 aaKnown RBP8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 C11orf1Q9H5F2 150 aa8.64□□□□□ -1.03
APOBEC3B-204ENST00000407298 DMBT1Q9UGM3 2413 aaPredicted RBP8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 A0A0J9YX75 114 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 F5H768 121 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 SOCS3O14543 225 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 SCGB1D2O95969 90 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 H2AFB2P0C5Z0 115 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 GATA2P23769 480 aaPredicted RBP8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 DEFB1P60022 68 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 ARL16Q0P5N6 197 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 CLINT1Q14677 625 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 OR8I2Q8N0Y5 310 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 PPP1R14BQ96C90 147 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 DOK5Q9P104 306 aa8.63□□□□□ -1.03
APOBEC3B-204ENST00000407298 FAM240BA0A1B0GVZ2 78 aa8.62□□□□□ -1.03
APOBEC3B-204ENST00000407298 C7orf66A4D0T2 115 aa8.62□□□□□ -1.03
APOBEC3B-204ENST00000407298 SNRPGP15A8MWD9 76 aa8.62□□□□□ -1.03
APOBEC3B-204ENST00000407298 TSC22D2O75157 780 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms