RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 WT1-ASQ06250 92 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST2H2BEQ16778 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 OR10J3Q5JRS4 329 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 SIGLEC15Q6ZMC9 328 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ORMDL3Q8N138 153 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BHQ93079 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 C11orf52Q96A22 123 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BNQ99877 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BMQ99879 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 UQCR10Q9UDW1 63 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV3-66A0A0C4DH42 116 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PSMB11A5LHX3 300 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 SRRM4A7MD48 611 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF726P1Q15940 193 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 MLANAQ16655 118 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 C1orf194Q5T5A4 169 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 LHFPL4Q7Z7J7 247 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF329Q86UD4 541 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 NEU1Q99519 415 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PMCHL2Q9BQD1 86 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 C2orf88Q9BSF0 95 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 TMEM70Q9BUB7 260 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF492Q9P255 531 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 COL4A2P08572 1712 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 DLEU1O43261 78 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 CXCL1P09341 107 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 CGB3P0DN86 165 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 CGB7P0DN87 165 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 MSMPQ1L6U9 139 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 KLF17Q5JT82 389 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 ZGRF1Q86YA3 2104 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 SHANK1Q9Y566 2161 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 TRBV20OR9-2A0A075B6H5 130 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 FAM231BA6NCW3 169 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 PGPEP1LA6NFU8 196 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 H3BUA1 57 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 ATP5LO75964 103 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 WISP2O76076 250 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 HTN1P15515 57 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 BTF3P20290 206 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 SPRNQ5BIV9 151 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 CT83Q5H943 113 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 LYRM7Q5U5X0 104 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 TMEM219Q86XT9 240 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF114Q8NC26 417 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 LINC00477Q96M19 166 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 KIR2DL4Q99706 377 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 PCNX1Q96RV3 2341 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 GCSHP23434 173 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 GRNP28799 593 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF138P52744 262 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 PSG3Q16557 428 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 LINC01559Q495D7 138 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 BRD3OSQ6XYD6 125 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 GFRA4Q9GZZ7 299 aa3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 BEX4Q9NWD9 120 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 LSM4Q9Y4Z0 139 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV3OR16-8A0A075B7F1 116 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 IGLC7A0M8Q6 106 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 A6NDN8 102 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 OR4C46A6NHA9 309 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 LINC01549A6NIU2 74 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 NUDT3O95989 172 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 CNTFRP26992 372 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 ADMP35318 185 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 FOXA3P55318 350 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 FAM231DQ6ZW35 169 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 TTC9CQ8N5M4 171 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 ITLN2Q8WWU7 325 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 CHCHD1Q96BP2 118 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 DERL1Q9BUN8 251 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 C11orf1Q9H5F2 150 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 SONP18583 2426 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 DOCK10Q96BY6 2186 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 ATP6V0E1O15342 81 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 PFN1P07737 140 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 LINC00614P0C842 121 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 IGLC1P0CG04 106 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 SPATA45Q537H7 98 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 ACTL10Q5JWF8 245 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 MALRD1Q5VYJ5 2156 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 EXOC3-AS1Q8N2X6 119 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 NPBQ8NG41 125 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 USF3Q68DE3 2245 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 A0A1B0GV72 72 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 J3QKU1 62 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 SERF1AO75920 110 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 IGLV2-14P01704 120 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 APOHP02749 345 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 PF4P02776 101 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 TYMSP04818 313 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 RRN3P1Q2M238 152 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 PYY3Q5JQD4 70 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 C12orf54Q6X4T0 127 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 Q86TA4 180 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 TMEM75Q8N9X5 138 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 PRORYQ9H606 182 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms