RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CLEC3BP05452 202 aa19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 CDX1P47902 265 aaPredicted RBP19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 SGK494Q96LW2 274 aa19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 C17orf77Q96MU5 243 aa19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 RABAC1Q9UI14 185 aa19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 TRAPPC1Q9Y5R8 145 aa19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 LRRK2Q5S007 2527 aa19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 CRYBG3Q68DQ2 2970 aa19.22■□□□□ 0.67
DNMT3A-206ENST00000406659 ZNF705GA8MUZ8 300 aaPredicted RBP19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 MRPS12O15235 138 aaKnown RBP19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 S100A7P31151 101 aa19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 CRIP2P52943 208 aaPredicted RBP19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 RPL15P61313 204 aaKnown RBP19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 LYPD1Q8N2G4 141 aa19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 SMIM12Q96EX1 92 aa19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 GPR82Q96P67 336 aa19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 ZNF414Q96IQ9 312 aa19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 PITPNC1Q9UKF7 332 aa19.21■□□□□ 0.67
DNMT3A-206ENST00000406659 TRBV7-1A0A0A6YYK4 115 aa19.2■□□□□ 0.66
DNMT3A-206ENST00000406659 BMPR1BO00238 502 aa19.2■□□□□ 0.66
DNMT3A-206ENST00000406659 KRTAP10-9P60411 292 aa19.2■□□□□ 0.66
DNMT3A-206ENST00000406659 ATP5G2Q06055 141 aa19.2■□□□□ 0.66
DNMT3A-206ENST00000406659 FAM231DQ6ZW35 169 aa19.2■□□□□ 0.66
DNMT3A-206ENST00000406659 OR8I2Q8N0Y5 310 aa19.2■□□□□ 0.66
DNMT3A-206ENST00000406659 BEX4Q9NWD9 120 aaPredicted RBP19.2■□□□□ 0.66
DNMT3A-206ENST00000406659 M0QZK8 103 aa19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 GATCO43716 136 aaKnown RBP19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 RPL19P84098 196 aaKnown RBP19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 C19orf54Q5BKX5 351 aa19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 CLEC19AQ6UXS0 136 aa19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 GNB4Q9HAV0 340 aa19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 LINC00527Q9UJ94 153 aa19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 J3QLI3 93 aa19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 PRR27Q6MZM9 219 aa19.19■□□□□ 0.66
DNMT3A-206ENST00000406659 IGHV3-35A0A0C4DH35 117 aa19.18■□□□□ 0.66
DNMT3A-206ENST00000406659 LTAP01374 205 aa19.18■□□□□ 0.66
DNMT3A-206ENST00000406659 RPL7P18124 248 aaKnown RBP19.18■□□□□ 0.66
DNMT3A-206ENST00000406659 SIGLEC15Q6ZMC9 328 aa19.18■□□□□ 0.66
DNMT3A-206ENST00000406659 GOLT1AQ6ZVE7 132 aa19.18■□□□□ 0.66
DNMT3A-206ENST00000406659 CCDC140Q96MF4 163 aa19.18■□□□□ 0.66
DNMT3A-206ENST00000406659 C12orf57Q99622 126 aa19.18■□□□□ 0.66
DNMT3A-206ENST00000406659 TGFAP01135 160 aa19.17■□□□□ 0.66
DNMT3A-206ENST00000406659 MEOX2P50222 304 aa19.17■□□□□ 0.66
DNMT3A-206ENST00000406659 LOXL1Q08397 574 aaPredicted RBP19.17■□□□□ 0.66
DNMT3A-206ENST00000406659 PDE6HQ13956 83 aa19.17■□□□□ 0.66
DNMT3A-206ENST00000406659 TOMM20LQ6UXN7 152 aa19.17■□□□□ 0.66
DNMT3A-206ENST00000406659 NUDT10Q8NFP7 164 aa19.17■□□□□ 0.66
DNMT3A-206ENST00000406659 NUDT11Q96G61 164 aa19.17■□□□□ 0.66
DNMT3A-206ENST00000406659 SMIM27A0A1W2PRY6 76 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 FAM223BA6NKX1 122 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 DEFB113Q30KQ7 82 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 FAM223AQ8IWN6 122 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 MAPK1IP1LQ8NDC0 245 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 ANKRD17O75179 2603 aaKnown RBP19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 RNF223E7ERA6 249 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 IGF1P05019 195 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 TCL1AP56279 114 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 GFI1BQ5VTD9 330 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 HIST3H2BBQ8N257 126 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 GRAMD2BQ96HH9 432 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 MLST8Q9BVC4 326 aa19.16■□□□□ 0.66
DNMT3A-206ENST00000406659 VPS13CQ709C8 3753 aa19.15■□□□□ 0.66
DNMT3A-206ENST00000406659 XKRY2A2RUG3 117 aa19.15■□□□□ 0.66
DNMT3A-206ENST00000406659 K7EQM0 130 aa19.15■□□□□ 0.66
DNMT3A-206ENST00000406659 IGHG2P01859 326 aa19.15■□□□□ 0.66
DNMT3A-206ENST00000406659 TRGV3P03979 118 aa19.15■□□□□ 0.66
DNMT3A-206ENST00000406659 AAMDCQ9H7C9 122 aa19.15■□□□□ 0.66
DNMT3A-206ENST00000406659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.14■□□□□ 0.66
DNMT3A-206ENST00000406659 IGHV3OR16-8A0A075B7F1 116 aa19.14■□□□□ 0.66
DNMT3A-206ENST00000406659 S100A2P29034 98 aa19.14■□□□□ 0.66
DNMT3A-206ENST00000406659 Q86TA4 180 aa19.14■□□□□ 0.66
DNMT3A-206ENST00000406659 IFITM10A6NMD0 228 aa19.14■□□□□ 0.65
DNMT3A-206ENST00000406659 IER3P46695 156 aa19.14■□□□□ 0.65
DNMT3A-206ENST00000406659 PSG9Q00887 426 aa19.14■□□□□ 0.65
DNMT3A-206ENST00000406659 PDZD11Q5EBL8 140 aa19.14■□□□□ 0.65
DNMT3A-206ENST00000406659 PRNTQ86SH4 94 aa19.14■□□□□ 0.65
DNMT3A-206ENST00000406659 LRRC75A-AS1Q8N1F1 130 aa19.14■□□□□ 0.65
DNMT3A-206ENST00000406659 ZFAND3Q9H8U3 227 aa19.14■□□□□ 0.65
DNMT3A-206ENST00000406659 TRBV6-1A0A0K0K1D8 114 aa19.13■□□□□ 0.65
DNMT3A-206ENST00000406659 CA1P00915 261 aaPredicted RBP19.13■□□□□ 0.65
DNMT3A-206ENST00000406659 CBLN1P23435 193 aa19.13■□□□□ 0.65
DNMT3A-206ENST00000406659 MBD6Q96DN6 1003 aa19.13■□□□□ 0.65
DNMT3A-206ENST00000406659 ATP6V0BQ99437 205 aa19.13■□□□□ 0.65
DNMT3A-206ENST00000406659 GPR61Q9BZJ8 451 aa19.13■□□□□ 0.65
DNMT3A-206ENST00000406659 CELSR2Q9HCU4 2923 aa19.12■□□□□ 0.65
DNMT3A-206ENST00000406659 TRAV8-1A0A0A6YYK1 113 aa19.12■□□□□ 0.65
DNMT3A-206ENST00000406659 SMIM6P0DI80 62 aa19.12■□□□□ 0.65
DNMT3A-206ENST00000406659 RELQ04864 619 aaPredicted RBP19.12■□□□□ 0.65
DNMT3A-206ENST00000406659 MAP1AP78559 2803 aaPredicted RBP19.12■□□□□ 0.65
DNMT3A-206ENST00000406659 IZUMO1RA6ND01 250 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 SPINK4O60575 86 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 IGLV2-11P01706 119 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 RAB9AP51151 201 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 BLCAPP62952 87 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 TMEM183AQ8IXX5 376 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 TMEM75Q8N9X5 138 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 ZNF492Q9P255 531 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 FBN2P35556 2912 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 SVEP1Q4LDE5 3571 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 CSMD1Q96PZ7 3565 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms