RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CHCHD1Q96BP2 118 aaKnown RBP14.77□□□□□ -0.04
COL18A1-204ENST00000400337 DPM2O94777 84 aa14.77□□□□□ -0.04
COL18A1-204ENST00000400337 LMO1P25800 156 aa14.77□□□□□ -0.05
COL18A1-204ENST00000400337 LYZL1Q6UWQ5 148 aa14.77□□□□□ -0.05
COL18A1-204ENST00000400337 HEATR5AQ86XA9 2040 aa14.77□□□□□ -0.05
COL18A1-204ENST00000400337 TRGV4A0A0C4DH28 118 aa14.77□□□□□ -0.05
COL18A1-204ENST00000400337 H3BUT2 72 aa14.77□□□□□ -0.05
COL18A1-204ENST00000400337 CNTFRP26992 372 aa14.77□□□□□ -0.05
COL18A1-204ENST00000400337 ZNF138P52744 262 aa14.76□□□□□ -0.05
COL18A1-204ENST00000400337 IFI27L1Q96BM0 104 aa14.76□□□□□ -0.05
COL18A1-204ENST00000400337 A0A1W2PPI3 338 aa14.76□□□□□ -0.05
COL18A1-204ENST00000400337 IGFL3Q6UXB1 125 aa14.76□□□□□ -0.05
COL18A1-204ENST00000400337 SRRM4A7MD48 611 aaKnown RBP14.75□□□□□ -0.05
COL18A1-204ENST00000400337 SAP30O75446 220 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 WDR86Q86TI4 376 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 VOPP1Q96AW1 172 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 D6R8Y8 96 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 AMBPP02760 352 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 PCP4P48539 62 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 C9orf139Q6ZV77 190 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 PLXNA4Q9HCM2 1894 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 E9PQ18 207 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 ITGB1BP1O14713 200 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 LCN12Q6JVE5 192 aa14.75□□□□□ -0.05
COL18A1-204ENST00000400337 NHP2Q9NX24 153 aaKnown RBP14.75□□□□□ -0.05
COL18A1-204ENST00000400337 DTX1Q86Y01 620 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 CREBBPQ92793 2442 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 TOMM40O96008 361 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 RSPO1Q2MKA7 263 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-204ENST00000400337 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 C5orf30Q96GV9 206 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 CD28P10747 220 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 DUX4L9Q6RFH8 374 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-204ENST00000400337 FCN3O75636 299 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 PSG3Q16557 428 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 CFAP161Q6P656 301 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 NUP35Q8NFH5 326 aa14.74□□□□□ -0.05
COL18A1-204ENST00000400337 CHTOPQ9Y3Y2 248 aaKnown RBP14.74□□□□□ -0.05
COL18A1-204ENST00000400337 SH2D1AO60880 128 aa14.73□□□□□ -0.05
COL18A1-204ENST00000400337 GATA4P43694 442 aa14.73□□□□□ -0.05
COL18A1-204ENST00000400337 GTSCR1Q86UQ5 136 aa14.73□□□□□ -0.05
COL18A1-204ENST00000400337 TMEM190Q8WZ59 177 aa14.73□□□□□ -0.05
COL18A1-204ENST00000400337 NOTCH4Q99466 2003 aa14.73□□□□□ -0.05
COL18A1-204ENST00000400337 TSPAN13O95857 204 aa14.73□□□□□ -0.05
COL18A1-204ENST00000400337 USMG5Q96IX5 58 aa14.73□□□□□ -0.05
COL18A1-204ENST00000400337 LY96Q9Y6Y9 160 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 TRAV12-3A0A0B4J271 114 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 IGKCP01834 107 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 SFTA2Q6UW10 78 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 CEACAM8P31997 349 aaPredicted RBP14.72□□□□□ -0.05
COL18A1-204ENST00000400337 Q8TCH9 128 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 DEFB104AQ8WTQ1 72 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 LIME1Q9H400 295 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 HELZP42694 1942 aaKnown RBP14.72□□□□□ -0.05
COL18A1-204ENST00000400337 LINC00479Q96M42 142 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 ANAPC10Q9UM13 185 aa14.72□□□□□ -0.05
COL18A1-204ENST00000400337 FNDC10F2Z333 226 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 RUSC1-AS1Q66K80 236 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 NOTCH3Q9UM47 2321 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 TRBV7-9A0A0J9YWB2 115 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 BEND2Q8NDZ0 799 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 IGHV3-73A0A0B4J1V6 119 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 SLC25A16P16260 332 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 TMEM256Q8N2U0 113 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 FAM90A2PQ658T7 463 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 LYPD1Q8N2G4 141 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 RHPN1-AS1Q9BWJ2 59 aa14.71□□□□□ -0.05
COL18A1-204ENST00000400337 ADCYAP1P18509 176 aa14.71□□□□□ -0.06
COL18A1-204ENST00000400337 MALP21145 153 aa14.71□□□□□ -0.06
COL18A1-204ENST00000400337 LAGE3Q14657 143 aa14.71□□□□□ -0.06
COL18A1-204ENST00000400337 LINC01356Q8N9X3 169 aa14.71□□□□□ -0.06
COL18A1-204ENST00000400337 RCHY1Q96PM5 261 aa14.71□□□□□ -0.06
COL18A1-204ENST00000400337 FAM223BA6NKX1 122 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 ACTL10Q5JWF8 245 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 FAM223AQ8IWN6 122 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 TMEM14BQ9NUH8 114 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 FXYD7P58549 80 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 ERVK11-1P61568 191 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 RASL11AQ6T310 242 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 ZNF562Q6V9R5 426 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 LINC00477Q96M19 166 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 FNDC4Q9H6D8 234 aaPredicted RBP14.7□□□□□ -0.06
COL18A1-204ENST00000400337 ANAPC1Q9H1A4 1944 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 CD300EQ496F6 205 aaPredicted RBP14.7□□□□□ -0.06
COL18A1-204ENST00000400337 CHCHD5Q9BSY4 110 aa14.7□□□□□ -0.06
COL18A1-204ENST00000400337 DOCK10Q96BY6 2186 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 DMRTC2Q8IXT2 367 aaPredicted RBP14.69□□□□□ -0.06
COL18A1-204ENST00000400337 SRSF8Q9BRL6 282 aaKnown RBP14.69□□□□□ -0.06
COL18A1-204ENST00000400337 OVOL3O00110 214 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 C17orf58Q2M2W7 97 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 TMEM249Q2WGJ8 235 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 LCNL1Q6ZST4 164 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 YLPM1P49750 1951 aaKnown RBP14.69□□□□□ -0.06
COL18A1-204ENST00000400337 IGHV3-64A0A075B6Q5 118 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 ZNF815PA8K554 130 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 SHANK2-AS3Q9BTD1 123 aa14.69□□□□□ -0.06
COL18A1-204ENST00000400337 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.69□□□□□ -0.063e-8■■■□□ 15.4
COL18A1-204ENST00000400337 RNF182Q8N6D2 247 aa14.68□□□□□ -0.06
COL18A1-204ENST00000400337 MST1LQ2TV78 715 aa14.68□□□□□ -0.06
COL18A1-204ENST00000400337 KLHL30-AS1Q8NEE0 82 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms