RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 ZNF479Q96JC4 524 aa9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 IGF2BP2-AS1Q96M15 143 aa9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 AMELYQ99218 206 aa9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 MRPS18CQ9Y3D5 142 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 SRRM4A7MD48 611 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 GREM1O60565 184 aa9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 MPV17L2Q567V2 206 aa9.03□□□□□ -0.96
CACNA1C-210ENST00000399606 IGLV1-36A0A0B4J1U3 117 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 TMEM238C9JI98 176 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 M0R1W7 72 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 IGHMP01871 453 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 SMIM2Q9BVW6 85 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 TMEM242Q9NWH2 141 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 GBF1Q92538 1859 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 KNL1Q8NG31 2342 aa9.02□□□□□ -0.96
CACNA1C-210ENST00000399606 PLA2G5P39877 138 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 FAM223BA6NKX1 122 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 C9orf66Q5T8R8 295 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 FAM223AQ8IWN6 122 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 ABCA7Q8IZY2 2146 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 TMEM14DPA8MWL7 114 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 F8W735 103 aaPredicted RBP9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 FAM90A9PA6NNJ1 464 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 Q8NFD4 153 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 J3QLI3 93 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 SERF1AO75920 110 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 NBL1P41271 181 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 HSD52Q0P140 79 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 LINC00114Q6XXX2 140 aa9.02□□□□□ -0.97
CACNA1C-210ENST00000399606 IGHV3-16A0A0C4DH30 117 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 NTN3O00634 580 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 IGHV4OR15-8A0A075B7B6 117 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 A0A087WW49 117 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 UBE2E1P51965 193 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 SNRNP200O75643 2136 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 MMP23AO75900 390 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 ATP5L2Q7Z4Y8 100 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 DNAJC30Q96LL9 226 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 TSSC4Q9Y5U2 329 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 IGHV1-3A0A0C4DH29 117 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 A0A0J9YY99 117 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 LEPROTO15243 131 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 MST1P26927 711 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 TRACP01848 142 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 CCL18P55774 89 aa9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 RNASE7Q9H1E1 156 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-210ENST00000399606 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
CACNA1C-210ENST00000399606 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
CACNA1C-210ENST00000399606 SRP19P09132 144 aaKnown RBP9□□□□□ -0.97
CACNA1C-210ENST00000399606 LAGE3Q14657 143 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 ATP6V0BQ99437 205 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 UPK2O00526 184 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 RASL10AQ92737 203 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 CTHRC1Q96CG8 243 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 ZSWIM8A7E2V4 1837 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 OVOL3O00110 214 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 IGHV1-69P01742 117 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 ACYP1P07311 99 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 RHPN1-AS1Q9BWJ2 59 aa9□□□□□ -0.97
CACNA1C-210ENST00000399606 IGLV3-19P01714 112 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 SMIM10L1P0DMW3 83 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 LYL1P12980 280 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 CRYGSP22914 178 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 CDKN1BP46527 198 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 SMIM10Q96HG1 83 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 SPXQ9BT56 116 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 TMEM170AQ8WVE7 144 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 XIRP1Q702N8 1843 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 ZNF837Q96EG3 531 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 NUP214P35658 2090 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 E7EQL1 145 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 IGFBP3P17936 291 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 RPL18AQ02543 176 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-210ENST00000399606 C4orf51C9J302 202 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 AZU1P20160 251 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 C1QTNF5Q9BXJ0 243 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 RPUSD1Q9UJJ7 312 aaKnown RBP8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 ANK1P16157 1881 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 HEPN1Q6WQI6 88 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 Q6ZS92 163 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 IGKV1D-12P01611 117 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
CACNA1C-210ENST00000399606 F2Z2F3 143 aa8.97□□□□□ -0.97
CACNA1C-210ENST00000399606 PPBPP02775 128 aa8.97□□□□□ -0.97
CACNA1C-210ENST00000399606 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
CACNA1C-210ENST00000399606 FOXG1P55316 489 aaPredicted RBP8.97□□□□□ -0.97
CACNA1C-210ENST00000399606 IGLV3-21P80748 117 aaPredicted RBP8.97□□□□□ -0.97
CACNA1C-210ENST00000399606 PMVKQ15126 192 aa8.97□□□□□ -0.97
CACNA1C-210ENST00000399606 MORN2Q502X0 79 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms