RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 GABARAPH6UMI1 98 aa12.27□□□□□ -0.45
UFD1-202ENST00000399523 GABARAPO95166 117 aa12.27□□□□□ -0.45
UFD1-202ENST00000399523 RPS19P39019 145 aaKnown RBP12.27□□□□□ -0.45
UFD1-202ENST00000399523 MEF2DQ14814 521 aa12.27□□□□□ -0.45
UFD1-202ENST00000399523 RNASE10Q5GAN6 216 aaKnown RBP12.27□□□□□ -0.45
UFD1-202ENST00000399523 IZUMO2Q6UXV1 221 aa12.27□□□□□ -0.45
UFD1-202ENST00000399523 LGI3Q8N145 548 aa12.27□□□□□ -0.45
UFD1-202ENST00000399523 TERB2Q8NHR7 220 aa12.27□□□□□ -0.45
UFD1-202ENST00000399523 SLC35E1Q96K37 410 aa12.27□□□□□ -0.45
UFD1-202ENST00000399523 LRP1Q07954 4544 aaKnown RBP12.27□□□□□ -0.45
UFD1-202ENST00000399523 TEX13DA0A0J9YY54 714 aaPredicted RBP12.26□□□□□ -0.45
UFD1-202ENST00000399523 SMIM31A0A1B0GVY4 71 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 GAGE12BA1L429 117 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 H7BYZ3 331 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 GAGE7O76087 117 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 GAGE12FP0CL80 117 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 GAGE12GP0CL81 117 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 GAGE12IP0CL82 117 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 ATP5IP56385 69 aaPredicted RBP12.26□□□□□ -0.45
UFD1-202ENST00000399523 RHOBP62745 196 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 ZNF738Q8NE65 137 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 OR8A1Q8NGG7 326 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 GPR82Q96P67 336 aa12.26□□□□□ -0.45
UFD1-202ENST00000399523 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
UFD1-202ENST00000399523 NXPH4O95158 308 aa12.25□□□□□ -0.45
UFD1-202ENST00000399523 CFDP00746 253 aaPredicted RBP12.25□□□□□ -0.45
UFD1-202ENST00000399523 TGFBR1P36897 503 aa12.25□□□□□ -0.45
UFD1-202ENST00000399523 HIST1H1AQ02539 215 aaPredicted RBP12.25□□□□□ -0.45
UFD1-202ENST00000399523 APOA1P02647 267 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 RLN2P04090 185 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 CD3DP04234 171 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 SULT1A3P0DMM9 295 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 SULT1A4P0DMN0 295 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 TBPP20226 339 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 CDKN1BP46527 198 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 TMEM268Q5VZI3 342 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 GGNBP1Q5YKI7 109 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 THAP8Q8NA92 274 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 MARCH1Q8TCQ1 289 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 VCX3BQ9H321 246 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 HSPB7Q9UBY9 170 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 RAB26Q9ULW5 256 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 DNAH8Q96JB1 4490 aa12.24□□□□□ -0.45
UFD1-202ENST00000399523 TMED4Q7Z7H5 227 aa12.23□□□□□ -0.45
UFD1-202ENST00000399523 OR4D10Q8NGI6 311 aa12.23□□□□□ -0.45
UFD1-202ENST00000399523 C20orf144Q9BQM9 153 aa12.23□□□□□ -0.45
UFD1-202ENST00000399523 TMPRSS5Q9H3S3 457 aa12.23□□□□□ -0.45
UFD1-202ENST00000399523 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
UFD1-202ENST00000399523 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
UFD1-202ENST00000399523 CCDC28AQ8IWP9 274 aa12.22□□□□□ -0.45
UFD1-202ENST00000399523 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
UFD1-202ENST00000399523 RBKSQ9H477 322 aa12.22□□□□□ -0.45
UFD1-202ENST00000399523 TNFAIP8O95379 198 aa12.21□□□□□ -0.45
UFD1-202ENST00000399523 PLA2G1BP04054 148 aaKnown RBP12.21□□□□□ -0.45
UFD1-202ENST00000399523 FGL1Q08830 312 aa12.21□□□□□ -0.45
UFD1-202ENST00000399523 DEFB104AQ8WTQ1 72 aa12.21□□□□□ -0.45
UFD1-202ENST00000399523 COMMD3Q9UBI1 195 aa12.21□□□□□ -0.45
UFD1-202ENST00000399523 SNURFLB1AK76 121 aa12.2□□□□□ -0.46
UFD1-202ENST00000399523 CXCL3P19876 107 aa12.2□□□□□ -0.46
UFD1-202ENST00000399523 S100A7P31151 101 aa12.2□□□□□ -0.46
UFD1-202ENST00000399523 DAZ2Q13117 558 aaKnown RBP12.2□□□□□ -0.46
UFD1-202ENST00000399523 KIR3DS1Q14943 382 aa12.2□□□□□ -0.46
UFD1-202ENST00000399523 GPR107Q5VW38 600 aa12.2□□□□□ -0.46
UFD1-202ENST00000399523 PLA2G2DQ9UNK4 145 aa12.2□□□□□ -0.46
UFD1-202ENST00000399523 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 IGLV5-52A0A0A0MRZ9 124 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 ORM2P19652 201 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 CCR6P51684 374 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 PSG3Q16557 428 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 SCGB2B2Q4G0G5 96 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 Q6ZTI0 123 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 MSRB1Q9NZV6 116 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 MTFP1Q9UDX5 166 aa12.19□□□□□ -0.46
UFD1-202ENST00000399523 C14orf166Q9Y224 244 aaKnown RBP12.19□□□□□ -0.46
UFD1-202ENST00000399523 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
UFD1-202ENST00000399523 K7EP13 123 aa12.18□□□□□ -0.46
UFD1-202ENST00000399523 SMCO1Q147U7 214 aa12.18□□□□□ -0.46
UFD1-202ENST00000399523 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
UFD1-202ENST00000399523 OR52I2Q8NH67 350 aa12.18□□□□□ -0.46
UFD1-202ENST00000399523 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
UFD1-202ENST00000399523 FAM30AQ9NZY2 134 aa12.18□□□□□ -0.46
UFD1-202ENST00000399523 ANKRD65E5RJM6 399 aa12.17□□□□□ -0.46
UFD1-202ENST00000399523 GATA2P23769 480 aaPredicted RBP12.17□□□□□ -0.46
UFD1-202ENST00000399523 NEDD8Q15843 81 aa12.17□□□□□ -0.46
UFD1-202ENST00000399523 BPIFCQ8NFQ6 507 aa12.17□□□□□ -0.46
UFD1-202ENST00000399523 NTN5Q8WTR8 489 aaPredicted RBP12.17□□□□□ -0.46
UFD1-202ENST00000399523 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
UFD1-202ENST00000399523 A0A087X0K7 114 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 NPIPB6E9PJ23 425 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 H3BRN7 92 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 RAB3DO95716 219 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 RPL7P18124 248 aaKnown RBP12.16□□□□□ -0.46
UFD1-202ENST00000399523 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
UFD1-202ENST00000399523 GFI1BQ5VTD9 330 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 TMEM229BQ8NBD8 167 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms