RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 VCYO14598 125 aa9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 AMBPP02760 352 aa9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 C5orf64Q2M2E5 130 aa9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 SP5Q6BEB4 398 aaPredicted RBP9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 TRGV9Q99603 122 aa9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 NHP2Q9NX24 153 aaKnown RBP9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 RPUSD1Q9UJJ7 312 aaKnown RBP9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 PYYP10082 97 aa9.57□□□□□ -0.88
CCDC144A-206ENST00000399273 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 Q96MF0 132 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 OSTCQ9NRP0 149 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 PKIGQ9Y2B9 76 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 CREBBPQ92793 2442 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 NHLRC3Q5JS37 347 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 SMPXQ9UHP9 88 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 NDPQ00604 133 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 DMRT1Q9Y5R6 373 aa9.56□□□□□ -0.88
CCDC144A-206ENST00000399273 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 HIST1H4AP62805 103 aaKnown RBP9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 SRRM5B3KS81 715 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 SAA4P35542 130 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 C1orf159Q96HA4 380 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 MSMBP08118 114 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 CD55P08174 381 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 LURAP1LQ8IV03 231 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 BPESC1Q9GZL8 116 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 DEPPQ9NTK1 212 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 RASL11AQ6T310 242 aa9.55□□□□□ -0.88
CCDC144A-206ENST00000399273 TMEM249Q2WGJ8 235 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 IFITM2Q01629 132 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 THAP8Q8NA92 274 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 TSKUQ8WUA8 353 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 DERL1Q9BUN8 251 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 COL4A1P02462 1669 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 A8MWV9 139 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 ZNF474Q6S9Z5 364 aaPredicted RBP9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 SRSF8Q9BRL6 282 aaKnown RBP9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 PRDM13Q9H4Q3 707 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 MSRB2Q9Y3D2 182 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 A0A1B0GWJ7 208 aa9.54□□□□□ -0.88
CCDC144A-206ENST00000399273 EML5Q05BV3 1969 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 TGFBR3LH3BV60 316 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 J3QKU1 62 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 LINC01619G3V211 115 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 SRP19P09132 144 aaKnown RBP9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 SUPT4H1P63272 117 aaKnown RBP9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 ADMP35318 185 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 CD300EQ496F6 205 aaPredicted RBP9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 EXOC3-AS1Q8N2X6 119 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 LSM4Q9Y4Z0 139 aaKnown RBP9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 SELENOKQ9Y6D0 94 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 TNFRSF6BO95407 300 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 IGFBP3P17936 291 aaPredicted RBP9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 MGST2Q99735 147 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 SNHG12Q9BXW3 62 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 MPTX1A8MV57 137 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 LINC00114Q6XXX2 140 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 SCRT1Q9BWW7 348 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 MYMXA0A1B0GTQ4 84 aa9.53□□□□□ -0.88
CCDC144A-206ENST00000399273 PINLYPA6NC86 204 aa9.52□□□□□ -0.88
CCDC144A-206ENST00000399273 ZNF329Q86UD4 541 aa9.52□□□□□ -0.88
CCDC144A-206ENST00000399273 CLDN16Q9Y5I7 305 aa9.52□□□□□ -0.88
CCDC144A-206ENST00000399273 C22orf46C9J442 243 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 MALRD1Q5VYJ5 2156 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 GAGE2EQ4V326 116 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 GAGE2DQ9UEU5 116 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 Q0VFX4 171 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 TRBV25-1A0A075B6N4 114 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 TMEM155Q4W5P6 130 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 FAM110DQ8TAY7 271 aaPredicted RBP9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 TFF1P04155 84 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 SYNJ2BPP57105 145 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 GGNQ86UU5 652 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 CSTL1Q9H114 145 aa9.52□□□□□ -0.89
CCDC144A-206ENST00000399273 IGKV1D-13A0A0B4J2D9 117 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 SERF1AO75920 110 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 IGKV1-13P0DP09 117 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 A0A1B0GTI1 187 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 H0YJW9 148 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 LYZL4Q96KX0 146 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 A6NNC1 897 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 H3BUT2 72 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 J3QLI3 93 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 FOXL1Q12952 345 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 TRAV13-1A0A0B4J241 112 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 PSG3Q16557 428 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 LYPD1Q8N2G4 141 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 LTBP1Q14766 1721 aa9.51□□□□□ -0.89
CCDC144A-206ENST00000399273 FNDC4Q9H6D8 234 aaPredicted RBP9.5□□□□□ -0.89
CCDC144A-206ENST00000399273 D6R8Y8 96 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms