RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 LYPD1Q8N2G4 141 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 SIGLECL1Q8N7X8 197 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 SPTBN4Q9H254 2564 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 ITPR1Q14643 2758 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 ARHGAP32A7KAX9 2087 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 GPX1P07203 203 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 FAM106CPP0CH98 169 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 FCGR2BP31994 310 aaPredicted RBP10.89□□□□□ -0.67
PRAME-202ENST00000398743 UQCRFS1P47985 274 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 UBE2E1P51965 193 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 Q56UQ5 140 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 C21orf62Q9NYP8 219 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 ZNF705FA8MVS1 300 aaPredicted RBP10.88□□□□□ -0.67
PRAME-202ENST00000398743 IGLV2-11P01706 119 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 ZNF705DP0CH99 300 aaPredicted RBP10.88□□□□□ -0.67
PRAME-202ENST00000398743 ZNF705BP0CI00 300 aaPredicted RBP10.88□□□□□ -0.67
PRAME-202ENST00000398743 CD33P20138 364 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 GDF5OSQ5U4N7 250 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 SIGLEC15Q6ZMC9 328 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 TCF24Q7RTU0 167 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 PRNTQ86SH4 94 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 C17orf77Q96MU5 243 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 C1RLQ9NZP8 487 aa10.88□□□□□ -0.67
PRAME-202ENST00000398743 POLR3KQ9Y2Y1 108 aaPredicted RBP10.88□□□□□ -0.67
PRAME-202ENST00000398743 TRBV6-1A0A0K0K1D8 114 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 A0A1B0GXF2 115 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 VWC2LB2RUY7 222 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 F8W735 103 aaPredicted RBP10.87□□□□□ -0.67
PRAME-202ENST00000398743 MRPS12O15235 138 aaKnown RBP10.87□□□□□ -0.67
PRAME-202ENST00000398743 CAMPP49913 170 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 TMEM75Q8N9X5 138 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 BPESC1Q9GZL8 116 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 SVEP1Q4LDE5 3571 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 IGHV7-81A0A0B4J1V7 117 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 A0A1W2PS18 150 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 K7EQM0 130 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 SCGB2A1O75556 95 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 GNLYP22749 145 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 COL8A1P27658 744 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 AMTP48728 403 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 TOMM20LQ6UXN7 152 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 CIARTQ8N365 385 aaPredicted RBP10.87□□□□□ -0.67
PRAME-202ENST00000398743 SOX21Q9Y651 276 aaPredicted RBP10.87□□□□□ -0.67
PRAME-202ENST00000398743 CSMD1Q96PZ7 3565 aa10.87□□□□□ -0.67
PRAME-202ENST00000398743 NPIPB6E9PJ23 425 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 C19orf84I3L1E1 186 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 OR2J3O76001 311 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 NDUFB8O95169 186 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 HBBP68871 147 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 Q8N9W7 124 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 C18orf32Q8TCD1 76 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 GTSF1Q8WW33 167 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 ZNF414Q96IQ9 312 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 NDUFAF3Q9BU61 184 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 COL6A6A6NMZ7 2263 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 FAM231BA6NCW3 169 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 ZNF324O75467 553 aaPredicted RBP10.86□□□□□ -0.67
PRAME-202ENST00000398743 PMCHP20382 165 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 LMO4P61968 165 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 PDE6HQ13956 83 aa10.86□□□□□ -0.67
PRAME-202ENST00000398743 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
PRAME-202ENST00000398743 KIR2DL5BA0A0G2JN68 375 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 KIR2DL5BA0A0G2JPC4 375 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 EGR2P11161 476 aaPredicted RBP10.85□□□□□ -0.67
PRAME-202ENST00000398743 KIR2DL5AQ8N109 375 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 BCL6BQ8N143 479 aaPredicted RBP10.85□□□□□ -0.67
PRAME-202ENST00000398743 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 LPAR2Q9HBW0 351 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 ZFP30Q9Y2G7 519 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 CHD8Q9HCK8 2581 aa10.85□□□□□ -0.67
PRAME-202ENST00000398743 OR2T8A6NH00 312 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 IGHV3-23P01764 117 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 SAA4P35542 130 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 FAM120AOSQ5T036 256 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 TEX43Q6ZNM6 134 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
PRAME-202ENST00000398743 PGLYRP4Q96LB8 373 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 AAMDCQ9H7C9 122 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
PRAME-202ENST00000398743 PSG3Q16557 428 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 AJUBAQ96IF1 538 aa10.84□□□□□ -0.67
PRAME-202ENST00000398743 ALKBH7Q9BT30 221 aaPredicted RBP10.84□□□□□ -0.67
PRAME-202ENST00000398743 ASH1LQ9NR48 2969 aaKnown RBP10.84□□□□□ -0.67
PRAME-202ENST00000398743 DIRC3C9JPN6 131 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 KRTDAPP60985 99 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 VN1R17PQ8TDU5 208 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 TXN2Q99757 166 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 PSG8Q9UQ74 426 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 OVOL3O00110 214 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 CTSGP08311 255 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 C16orf54Q6UWD8 224 aa10.83□□□□□ -0.68
PRAME-202ENST00000398743 FAM110DQ8TAY7 271 aaPredicted RBP10.83□□□□□ -0.68
PRAME-202ENST00000398743 ZC2HC1AQ96GY0 325 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 1731.1 ms