RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 C11orf52Q96A22 123 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 SMAD5-AS1Q9Y6J3 95 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 NOTCH2Q04721 2471 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 PDE6DO43924 150 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 OR4F5Q8NH21 305 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 OR4F4Q96R69 305 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 TSPAN4O14817 238 aa9.74□□□□□ -0.85
TRIM39-204ENST00000396548 BUB3O43684 328 aa9.74□□□□□ -0.85
TRIM39-204ENST00000396548 CRLF1O75462 422 aa9.74□□□□□ -0.85
TRIM39-204ENST00000396548 NDUFB4O95168 129 aa9.74□□□□□ -0.85
TRIM39-204ENST00000396548 NDUFA7O95182 113 aa9.74□□□□□ -0.85
TRIM39-204ENST00000396548 APOC3P02656 99 aa9.74□□□□□ -0.85
TRIM39-204ENST00000396548 APOHP02749 345 aaPredicted RBP9.74□□□□□ -0.85
TRIM39-204ENST00000396548 SETXQ7Z333 2677 aaKnown RBP9.74□□□□□ -0.85
TRIM39-204ENST00000396548 IGHV3OR16-8A0A075B7F1 116 aa9.74□□□□□ -0.85
TRIM39-204ENST00000396548 LGALS1P09382 135 aaKnown RBP9.74□□□□□ -0.85
TRIM39-204ENST00000396548 F6UZH7 168 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 GGCTO75223 188 aaKnown RBP9.73□□□□□ -0.85
TRIM39-204ENST00000396548 NBEAP1P0C6P0 100 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 HIST1H1EP10412 219 aaKnown RBP9.73□□□□□ -0.85
TRIM39-204ENST00000396548 SOHLH1Q5JUK2 328 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 CST9LP1Q5W188 147 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 LINC01006Q8NI28 216 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 GPHB5Q86YW7 130 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 TRBV19A0A075B6N1 114 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 S100A7AQ86SG5 101 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 ELOVL1Q9BW60 279 aa9.73□□□□□ -0.85
TRIM39-204ENST00000396548 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
TRIM39-204ENST00000396548 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
TRIM39-204ENST00000396548 SVBPQ8N300 66 aa9.72□□□□□ -0.85
TRIM39-204ENST00000396548 JMJD8Q96S16 334 aa9.72□□□□□ -0.85
TRIM39-204ENST00000396548 CDX1P47902 265 aaPredicted RBP9.72□□□□□ -0.85
TRIM39-204ENST00000396548 C1orf194Q5T5A4 169 aa9.72□□□□□ -0.85
TRIM39-204ENST00000396548 NKX6-2Q9C056 277 aaPredicted RBP9.72□□□□□ -0.85
TRIM39-204ENST00000396548 PARLQ9H300 379 aa9.72□□□□□ -0.85
TRIM39-204ENST00000396548 FLNBO75369 2602 aaKnown RBP9.72□□□□□ -0.85
TRIM39-204ENST00000396548 HIVEP2P31629 2446 aa9.72□□□□□ -0.85
TRIM39-204ENST00000396548 OR5B12Q96R08 314 aa9.71□□□□□ -0.85
TRIM39-204ENST00000396548 A0A087X0K7 114 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 SNRPCP09234 159 aaKnown RBP9.71□□□□□ -0.86
TRIM39-204ENST00000396548 CLRN3Q8NCR9 226 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 C2CD4CQ8TF44 421 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 SLC17A3O00476 420 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 FAM74A3Q4VXF1 159 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 C16orf54Q6UWD8 224 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 BLNKQ8WV28 456 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 C4orf3Q8WVX3 66 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 RNF24Q9Y225 148 aa9.71□□□□□ -0.86
TRIM39-204ENST00000396548 MTORP42345 2549 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 A0A087WW49 117 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 K7EMT4 169 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
TRIM39-204ENST00000396548 METTL26Q96S19 204 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 FN1P02751 2386 aaKnown RBP9.7□□□□□ -0.86
TRIM39-204ENST00000396548 TRBV20OR9-2A0A075B6H5 130 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 H3BTX0 84 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 CRYBA1P05813 215 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 PDE6HQ13956 83 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 SDF2L1Q9HCN8 221 aa9.7□□□□□ -0.86
TRIM39-204ENST00000396548 ZNF207O43670 478 aaKnown RBP9.69□□□□□ -0.86
TRIM39-204ENST00000396548 RPL7P18124 248 aaKnown RBP9.69□□□□□ -0.86
TRIM39-204ENST00000396548 S100A7P31151 101 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 CEBPGP53567 150 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 RANP62826 216 aaKnown RBP9.69□□□□□ -0.86
TRIM39-204ENST00000396548 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 LYPD1Q8N2G4 141 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 GPR82Q96P67 336 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 Q9H3A6 140 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 LGALS9O00182 355 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 TCF21O43680 179 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 OR4F17Q8NGA8 305 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 A8MWP6 167 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 ZNF253O75346 499 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 SNAPINO95295 136 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 PROK1P58294 105 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 RPUSD4Q96CM3 377 aaKnown RBP9.69□□□□□ -0.86
TRIM39-204ENST00000396548 OTORQ9NRC9 128 aa9.69□□□□□ -0.86
TRIM39-204ENST00000396548 EDN2P20800 178 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 KLF5Q13887 457 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-204ENST00000396548 C20orf24Q9BUV8 137 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 CD28P10747 220 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 AWAT1Q58HT5 328 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 NIPSNAP3BQ9BS92 247 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 EPDR1Q9UM22 224 aa9.68□□□□□ -0.86
TRIM39-204ENST00000396548 IGHV7-4-1A0A0J9YVY3 117 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 PGPA6NDG6 321 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 OR8I2Q8N0Y5 310 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms