RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 NUDT11Q96G61 164 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 TRAV20A0A0B4J274 112 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 IZUMO1RA6ND01 250 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 M0QZK8 103 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 PRB1P04280 392 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 CBLN1P23435 193 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
SNX6-202ENST00000396526 SMIM27A0A1W2PRY6 76 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 A8MWL6 223 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 P01737 135 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 GOLT1AQ6ZVE7 132 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 SGK494Q96LW2 274 aa12.65□□□□□ -0.38
SNX6-202ENST00000396526 CTSGP08311 255 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 HLA-DQA1P01909 254 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 CRISP2P16562 243 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 GPR183P32249 361 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 EXOC3-AS1Q8N2X6 119 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 TRBV7-1A0A0A6YYK4 115 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 SERTM2A0A1B0GWG4 89 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 SPINK4O60575 86 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 TMEM219Q86XT9 240 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 HIF1ANQ9NWT6 349 aa12.64□□□□□ -0.39
SNX6-202ENST00000396526 AMY1AP04745 511 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 ATP5G2Q06055 141 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 TRAV41A0A0B4J266 112 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 LTAP01374 205 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 CLEC3BP05452 202 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 ZNF502Q8TBZ5 544 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 TSKUQ8WUA8 353 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 ZNF492Q9P255 531 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 ADMP35318 185 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 PRNTQ86SH4 94 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 ZNF414Q96IQ9 312 aa12.63□□□□□ -0.39
SNX6-202ENST00000396526 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
SNX6-202ENST00000396526 MRPL54Q6P161 138 aaKnown RBP12.62□□□□□ -0.39
SNX6-202ENST00000396526 IFITM10A6NMD0 228 aa12.62□□□□□ -0.39
SNX6-202ENST00000396526 F8W735 103 aaPredicted RBP12.62□□□□□ -0.39
SNX6-202ENST00000396526 G3V318 75 aa12.62□□□□□ -0.39
SNX6-202ENST00000396526 COL8A1P27658 744 aa12.62□□□□□ -0.39
SNX6-202ENST00000396526 KLK9Q2XQG4 91 aa12.62□□□□□ -0.39
SNX6-202ENST00000396526 ZNF843Q8N446 348 aa12.62□□□□□ -0.39
SNX6-202ENST00000396526 RPP21Q9H633 154 aaKnown RBP12.62□□□□□ -0.39
SNX6-202ENST00000396526 KLK9Q9UKQ9 250 aa12.62□□□□□ -0.39
SNX6-202ENST00000396526 MS4A10Q96PG2 267 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 ATP6V0BQ99437 205 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 MLST8Q9BVC4 326 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 TRBV6-1A0A0K0K1D8 114 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 FBLL1A6NHQ2 334 aaKnown RBP12.61□□□□□ -0.39
SNX6-202ENST00000396526 RNF224P0DH78 156 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 CT45A10P0DMU9 189 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 SLC35B1P78383 322 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 CT83Q5H943 113 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 SIGLEC15Q6ZMC9 328 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 BAGE3Q86Y29 109 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 PAX1P15863 534 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 Q86TA4 180 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 TMEM75Q8N9X5 138 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 MYO18BQ8IUG5 2567 aa12.61□□□□□ -0.39
SNX6-202ENST00000396526 FAM223BA6NKX1 122 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 IGHV4-38-2P0DP08 117 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 CLEC19AQ6UXS0 136 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 FAM223AQ8IWN6 122 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 GBGT1Q8N5D6 347 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 ARL6IP6Q8N6S5 226 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 OR4B1Q8NGF8 309 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 FAM208BQ5VWN6 2430 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 CA1P00915 261 aaPredicted RBP12.6□□□□□ -0.39
SNX6-202ENST00000396526 LINC01356Q8N9X3 169 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 SH2D7A6NKC9 451 aaPredicted RBP12.6□□□□□ -0.39
SNX6-202ENST00000396526 H3BUX3 64 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 LY6EQ16553 131 aa12.6□□□□□ -0.39
SNX6-202ENST00000396526 SOX21Q9Y651 276 aaPredicted RBP12.6□□□□□ -0.39
SNX6-202ENST00000396526 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 ATP5L2Q7Z4Y8 100 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 MBD6Q96DN6 1003 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 PSG8Q9UQ74 426 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 IGSF10Q6WRI0 2623 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 A1L4Q6 167 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 AMBPP02760 352 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 PYY3Q5JQD4 70 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 C17orf77Q96MU5 243 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 BBC3Q96PG8 261 aaPredicted RBP12.59□□□□□ -0.39
SNX6-202ENST00000396526 METTL26Q96S19 204 aa12.59□□□□□ -0.39
SNX6-202ENST00000396526 HIGD1CA8MV81 97 aa12.58□□□□□ -0.39
SNX6-202ENST00000396526 TRGV3P03979 118 aa12.58□□□□□ -0.39
SNX6-202ENST00000396526 PSG3Q16557 428 aa12.58□□□□□ -0.39
SNX6-202ENST00000396526 NEU1Q99519 415 aa12.58□□□□□ -0.39
SNX6-202ENST00000396526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.58□□□□□ -0.42e-7■■■□□ 16.9
SNX6-202ENST00000396526 TRAV8-1A0A0A6YYK1 113 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 IGHV3-35A0A0C4DH35 117 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 MRPS12O15235 138 aaKnown RBP12.58□□□□□ -0.4
SNX6-202ENST00000396526 APCSP02743 223 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 NUP35Q8NFH5 326 aa12.58□□□□□ -0.4
SNX6-202ENST00000396526 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms