RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 SMIM27A0A1W2PRY6 76 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 SH2D7A6NKC9 451 aaPredicted RBP11.68□□□□□ -0.54
CBX3-202ENST00000396386 MRPS12O15235 138 aaKnown RBP11.68□□□□□ -0.54
CBX3-202ENST00000396386 IGHV4-38-2P0DP08 117 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 CBLN1P23435 193 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 C15orf32Q32M92 178 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 Q86TA4 180 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 EXOC3-AS1Q8N2X6 119 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 ZNF502Q8TBZ5 544 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 NRGNQ92686 78 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 LTAP01374 205 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 CTSGP08311 255 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 SLC25A16P16260 332 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 TCL1AP56279 114 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 PRR27Q6MZM9 219 aa11.68□□□□□ -0.54
CBX3-202ENST00000396386 PCP4L1A6NKN8 68 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 B4DSR2 109 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 FABP4P15090 132 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 S100A7P31151 101 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 GPR183P32249 361 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 ADMP35318 185 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 IER3P46695 156 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 COX19Q49B96 90 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 SIGLEC15Q6ZMC9 328 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 OR10D4PQ8NGN7 298 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 PIFOQ8TCI5 191 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 MBD6Q96DN6 1003 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 GRAMD2BQ96HH9 432 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 MRPL18Q9H0U6 180 aaKnown RBP11.67□□□□□ -0.54
CBX3-202ENST00000396386 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
CBX3-202ENST00000396386 CYSRT1A8MQ03 144 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 G3V318 75 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
CBX3-202ENST00000396386 PDE6HQ13956 83 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 GOLT1AQ6ZVE7 132 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 BCL6BQ8N143 479 aaPredicted RBP11.66□□□□□ -0.54
CBX3-202ENST00000396386 NUDT10Q8NFP7 164 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 NUDT11Q96G61 164 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 MLST8Q9BVC4 326 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 ZNF492Q9P255 531 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 TRAV20A0A0B4J274 112 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 TRBV6-1A0A0K0K1D8 114 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 LINC01548A6NM66 108 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 SNURFLB1AK76 121 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 BMPR1BO00238 502 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 MT-ND6P03923 174 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 EEF1AKMT3Q96AZ1 226 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 C17orf77Q96MU5 243 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 HIST1H2BLQ99880 126 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 GNB1LQ9BYB4 327 aa11.66□□□□□ -0.54
CBX3-202ENST00000396386 MED13LQ71F56 2210 aa11.65□□□□□ -0.54
CBX3-202ENST00000396386 TRAV41A0A0B4J266 112 aa11.65□□□□□ -0.54
CBX3-202ENST00000396386 K7EQM0 130 aa11.65□□□□□ -0.54
CBX3-202ENST00000396386 CA1P00915 261 aaPredicted RBP11.65□□□□□ -0.54
CBX3-202ENST00000396386 AMY1AP04745 511 aa11.65□□□□□ -0.54
CBX3-202ENST00000396386 RPL7P18124 248 aaKnown RBP11.65□□□□□ -0.54
CBX3-202ENST00000396386 GATA3P23771 443 aa11.65□□□□□ -0.54
CBX3-202ENST00000396386 SRSF1Q07955 248 aaKnown RBP eCLIP11.65□□□□□ -0.544e-9■■□□□ 11.7
CBX3-202ENST00000396386 TMEM75Q8N9X5 138 aa11.65□□□□□ -0.54
CBX3-202ENST00000396386 PACRGQ96M98 296 aaPredicted RBP11.65□□□□□ -0.54
CBX3-202ENST00000396386 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.54
CBX3-202ENST00000396386 DOPEY2Q9Y3R5 2298 aa11.65□□□□□ -0.55
CBX3-202ENST00000396386 A1L4Q6 167 aa11.64□□□□□ -0.55
CBX3-202ENST00000396386 C19orf54Q5BKX5 351 aa11.64□□□□□ -0.55
CBX3-202ENST00000396386 CCDC140Q96MF4 163 aa11.64□□□□□ -0.55
CBX3-202ENST00000396386 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
CBX3-202ENST00000396386 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
CBX3-202ENST00000396386 USP9XQ93008 2570 aaPredicted RBP11.64□□□□□ -0.55
CBX3-202ENST00000396386 ABCA1O95477 2261 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 SPINK4O60575 86 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 RPP21Q9H633 154 aaKnown RBP11.63□□□□□ -0.55
CBX3-202ENST00000396386 TRAV8-1A0A0A6YYK1 113 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 A6NDX4 124 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 H3BUX3 64 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 IGLV2-11P01706 119 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 AMBPP02760 352 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 SLC35B1P78383 322 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 PSG9Q00887 426 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 CT83Q5H943 113 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 PYY3Q5JQD4 70 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 C9orf152Q5JTZ5 239 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 MRPL54Q6P161 138 aaKnown RBP11.63□□□□□ -0.55
CBX3-202ENST00000396386 TMEM136Q6ZRR5 245 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 PRNTQ86SH4 94 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 ZFAND3Q9H8U3 227 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 GNB4Q9HAV0 340 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 NAT8BQ9UHF3 227 aa11.63□□□□□ -0.55
CBX3-202ENST00000396386 C19orf71A6NCJ1 209 aa11.62□□□□□ -0.55
CBX3-202ENST00000396386 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
CBX3-202ENST00000396386 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
CBX3-202ENST00000396386 FRMD6-AS1P0C7T7 363 aa11.62□□□□□ -0.55
CBX3-202ENST00000396386 S100A12P80511 92 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms