RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 A8MXK9 166 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 SERF1AO75920 110 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 TMEM178BH3BS89 294 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 SRP19P09132 144 aaKnown RBP6.13□□□□□ -1.43
SYNE2-205ENST00000394768 ZNF250P15622 560 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 NEUROG3Q9Y4Z2 214 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 WDR90Q96KV7 1748 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 TRAV13-2A0A0B4J235 113 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 C18orf12Q96KH6 178 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 AMELYQ99218 206 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 CITED2Q99967 270 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-205ENST00000394768 I3L3M4 83 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 DEFB130BP0DP73 79 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 DEFB130AP0DP74 79 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 TMEM258P61165 79 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 NPIPB5A8MRT5 1133 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 PLAC1Q9HBJ0 212 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 WISP3O95389 354 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-205ENST00000394768 C1orf194Q5T5A4 169 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 WNK1Q9H4A3 2382 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 IGHV1-18A0A0C4DH31 117 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 A0A1B0GUS0 222 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 UBE2BP63146 152 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 FOXL1Q12952 345 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 KLF5Q13887 457 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-205ENST00000394768 SPRED2Q7Z698 418 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 RNF152Q8N8N0 203 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 HELZP42694 1942 aaKnown RBP6.12□□□□□ -1.43
SYNE2-205ENST00000394768 BUB1B-PAK6H3BSN5 160 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 TICRRQ7Z2Z1 1910 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 NRXN2Q9P2S2 1712 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 IGHV3OR16-8A0A075B7F1 116 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 MEGF9Q9H1U4 602 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 ZSWIM8A7E2V4 1837 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 TIAF1O95411 115 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 FAM19A2Q8N3H0 131 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 WBP1Q96G27 269 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 D6R8Y8 96 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.43
SYNE2-205ENST00000394768 CSTL1Q9H114 145 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 RAMP3O60896 148 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 LHFPL4Q7Z7J7 247 aa6.12□□□□□ -1.43
SYNE2-205ENST00000394768 MUC21A0A0G2JKD1 596 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 MUC21A0A140T8X8 626 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 IGHV1-46P01743 117 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 MSMBP08118 114 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 LY6DQ14210 128 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 LURAP1LQ8IV03 231 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 IGHV3-64A0A075B6Q5 118 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 RPL23P62829 140 aaKnown RBP6.11□□□□□ -1.43
SYNE2-205ENST00000394768 Q5PR19 223 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 GPHA2Q96T91 129 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 PMS2P5A8MQ11 134 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 FCN3O75636 299 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 ATP5G3P48201 142 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 GNG5P63218 68 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 COX11Q9Y6N1 276 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 FNDC1Q4ZHG4 1894 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-205ENST00000394768 ZNF362Q5T0B9 420 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-205ENST00000394768 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 MPZP25189 248 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 TMEM75Q8N9X5 138 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 CHKB-CPT1BH3BT56 60 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 TRAV13-1A0A0B4J241 112 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 TRAV1-1A0A0B4J248 108 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 SNAI2O43623 268 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 RHPN1-AS1Q9BWJ2 59 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 CELA3BP08861 270 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 TRAV5A0A0B4J249 113 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 CELA3AP09093 270 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
SYNE2-205ENST00000394768 FNDC4Q9H6D8 234 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-205ENST00000394768 MRPL27Q9P0M9 148 aaKnown RBP6.11□□□□□ -1.43
SYNE2-205ENST00000394768 ANAPC1Q9H1A4 1944 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 PFN1P07737 140 aaKnown RBP6.1□□□□□ -1.43
SYNE2-205ENST00000394768 GFI1BQ5VTD9 330 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 BCL6BQ8N143 479 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-205ENST00000394768 SIGLEC9Q9Y336 463 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 NDUFB1O75438 58 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 UBE2E1P51965 193 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 NDUFAF3Q9BU61 184 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 A0A0U1RRA0 63 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 NDUFS5O43920 106 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 TMEM200BQ69YZ2 307 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 TMEM256Q8N2U0 113 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 HERVK_113P63121 156 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 OCIAD2Q56VL3 154 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 GATA4P43694 442 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 RPL15P61313 204 aaKnown RBP6.1□□□□□ -1.43
SYNE2-205ENST00000394768 RTBDNQ9BSG5 229 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-205ENST00000394768 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 TCRAP04437 139 aa6.1□□□□□ -1.43
SYNE2-205ENST00000394768 STPG4Q8N801 248 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 FAM208BQ5VWN6 2430 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 IGHV3-73A0A0B4J1V6 119 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 LINC01545Q5VT33 79 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 K7EMI3 77 aa6.09□□□□□ -1.43
SYNE2-205ENST00000394768 ADMP35318 185 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms