RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 MPV17L2Q567V2 206 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 LINC00173Q6ZV60 143 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 OR4C5Q8NGB2 326 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 OR10AG1Q8NH19 301 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 TMUB1Q9BVT8 246 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 RAB1BQ9H0U4 201 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 PSG8Q9UQ74 426 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 LOC105371242A0A075B767 164 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 IGHV3-72A0A0B4J1Y9 119 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 hDV102S1A0JD36 115 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 M0QZ24 198 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 TAX1BP3O14907 124 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 TOX4O94842 621 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 NUDT3O95989 172 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 COX8AP10176 69 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 CNTFRP26992 372 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 PCP4P48539 62 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 RBX1P62877 108 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 SIGLEC15Q6ZMC9 328 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 FA2HQ7L5A8 372 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 COX8CQ7Z4L0 72 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 EXOC3-AS1Q8N2X6 119 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 ZC2HC1AQ96GY0 325 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 ZNF48Q96MX3 618 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-203ENST00000393211 ZNF747Q9BV97 191 aa7.92□□□□□ -1.14
COL17A1-203ENST00000393211 COL25A1Q9BXS0 654 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-203ENST00000393211 TRAV8-1A0A0A6YYK1 113 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 WI2-2373I1.2A0A1W2PRP0 233 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 ZNF785A8K8V0 405 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 B9A039 149 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 LY6LH3BQJ8 138 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 H3BTX0 84 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 APOBEC3AP31941 199 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-203ENST00000393211 VAMP3Q15836 100 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 PRSS33Q8NF86 280 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 OR1N2Q8NGR9 330 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 RPEQ96AT9 228 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 NPFFR1Q9GZQ6 430 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 U3KQK5 164 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 BDP1A6H8Y1 2624 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 NAV3Q8IVL0 2385 aa7.91□□□□□ -1.14
COL17A1-203ENST00000393211 PLCE1Q9P212 2302 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 IGHV3-21A0A0B4J1V1 117 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 SHISA9B4DS77 424 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 K7EIM0 57 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
COL17A1-203ENST00000393211 ARMS2P0C7Q2 107 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 CT45A10P0DMU9 189 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 CD24P25063 80 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 GPR183P32249 361 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 SEC11AP67812 179 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 PLGLAQ15195 96 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 PSMG4Q5JS54 123 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 LHFPL4Q7Z7J7 247 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 ZNF491Q8N8L2 437 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 PRSS3P2Q8NHM4 247 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 RNASE8Q8TDE3 154 aaKnown RBP7.9□□□□□ -1.14
COL17A1-203ENST00000393211 RNF125Q96EQ8 232 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 ZNF414Q96IQ9 312 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 FBXL15Q9H469 300 aa7.9□□□□□ -1.14
COL17A1-203ENST00000393211 E7EQL1 145 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 ARF6P62330 175 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 PSG9Q00887 426 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 SAPCD1Q5SSQ6 148 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 AAMDCQ9H7C9 122 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 VPS13AQ96RL7 3174 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 NCOR1O75376 2440 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 CNIH1O95406 144 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 S100A7P31151 101 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 SRSF2Q01130 221 aaKnown RBP7.89□□□□□ -1.15
COL17A1-203ENST00000393211 LGALS9BQ3B8N2 356 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 LGALS9CQ6DKI2 356 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 Q6ZVH6 145 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 NPBQ8NG41 125 aa7.89□□□□□ -1.15
COL17A1-203ENST00000393211 PEF1Q9UBV8 284 aaKnown RBP7.89□□□□□ -1.15
COL17A1-203ENST00000393211 FRYQ5TBA9 3013 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 PPIAL4CA0A0B4J2A2 164 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 MUC21A0A0G2JKD1 596 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 MUC21A0A140T8X8 626 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 SIVA1O15304 175 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 NDUFA3O95167 84 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 PPBPP02775 128 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 CSN3P07498 182 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 APELAP0DMC3 54 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 PPIAL4GP0DN37 164 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 CRIP1P50238 77 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 ZNF138P52744 262 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 MUC21Q5SSG8 566 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 FAM104BQ5XKR9 115 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 IGFBPL1Q8WX77 278 aa7.88□□□□□ -1.15
COL17A1-203ENST00000393211 TMEM189A5PLL7 270 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 NPIPB5A8MRT5 1133 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 NBR2O15453 112 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 SCGB2A1O75556 95 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 IL4P05112 153 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 CD3EP07766 207 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 CEACAM3P40198 252 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 MFAP4P55083 255 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 ORMDL3Q8N138 153 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 LY6G5BQ8NDX9 201 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms