RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 CBLN1P23435 193 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 COX7A1P24310 79 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 SLURP1P55000 103 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 DSCR9P59020 149 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 CYCSP99999 105 aaKnown RBP2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 DAZAP2Q15038 168 aaPredicted RBP2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 TWIST1Q15672 202 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 ZNF876PQ49A33 203 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 SPATA45Q537H7 98 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 FAM78AQ5JUQ0 283 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 LAIR2Q6ISS4 152 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 C11orf87Q6NUJ2 197 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 GUSBP11Q6P575 273 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 Q6YL49 198 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 NFE4Q86UQ8 179 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 ZNF645Q8N7E2 425 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 NRACQ8N912 160 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 C15orf53Q8NAA6 179 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 OR10G2Q8NGC3 310 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 PPDPFLQ8WWR9 84 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 FGF13Q92913 245 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 RMI2Q96E14 147 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 ATXN7L3BQ96GX2 97 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 PRAC1Q96KF2 57 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 POLR2J2Q9GZM3 115 aaKnown RBP2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 TNFRSF19Q9NS68 423 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 EPDR1Q9UM22 224 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 C10orf71Q711Q0 1435 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 LAMC3Q9Y6N6 1575 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 TOPAZ1Q8N9V7 1692 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 SCN8AQ9UQD0 1980 aa2.47□□□□□ -2.01
TRAJ17-201ENST00000390520 ANAPC1Q9H1A4 1944 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 KIDINS220Q9ULH0 1771 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 MAP3K4Q9Y6R4 1608 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 LRRC9Q6ZRR7 1453 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 MICAL3Q7RTP6 2002 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 CDC42BPAQ5VT25 1732 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 TRBV24-1A0A075B6N3 115 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 IGHV3OR15-7A0A075B7D8 119 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 IGHV3OR16-10A0A075B7F0 116 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 IGHV4-30-2A0A087WSY4 118 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 TRAV19A0A0A6YYK7 116 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 IGHV3-16A0A0C4DH30 117 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 RPL37AP8A6NKH3 93 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 A8MWL6 223 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 GNGT2O14610 69 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 IL5P05113 134 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 ZNF688P0C7X2 276 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 CCL4P13236 92 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 ZNF32P17041 273 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 ELK1P19419 428 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 PI3P19957 117 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 NFYAP23511 347 aaPredicted RBP2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 LMO2P25791 158 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 ATP5EP56381 51 aaPredicted RBP2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 FHL1Q13642 323 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 LY6G5CQ5SRR4 150 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 C10orf25Q5T742 122 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 XAF1Q6GPH4 301 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 REG3GQ6UW15 175 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 ZNF497Q6ZNH5 498 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 ZNF575Q86XF7 245 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 POM121L12Q8N7R1 296 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 NUP37Q8NFH4 326 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 C10orf105Q8TEF2 133 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 VOPP1Q96AW1 172 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 PRO0461Q9UI25 63 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 TICRRQ7Z2Z1 1910 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 RGPD3A6NKT7 1758 aaPredicted RBP2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 MYO9BQ13459 2157 aa2.46□□□□□ -2.02
TRAJ17-201ENST00000390520 ARID1AO14497 2285 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 SNRNP200O75643 2136 aaKnown RBP2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 COL11A2P13942 1736 aaPredicted RBP2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 MED1Q15648 1581 aaPredicted RBP2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 COL4A3Q01955 1670 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 A0A087WW49 117 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 A0A087X002 238 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 IGHV3-74A0A0B4J1X5 117 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 IGKV1-6A0A0C4DH72 117 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 IGLV5-39A0A0G2JS06 123 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 KLF18A0A0U1RQI7 1052 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 ZNF503-AS2A6NEH8 195 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 SLC25A14O95258 325 aaPredicted RBP2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 IGKV1-39P01597 117 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 IGKCP01834 107 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 IGKV1-16P04430 117 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 IGKV1D-39P04432 117 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 SFTA3P0C7M3 94 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 SSR2P43308 183 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 CRIP2P52943 208 aaPredicted RBP2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 LSM3P62310 102 aaKnown RBP2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 BSPH1Q075Z2 132 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 ELOBQ15370 118 aa2.45□□□□□ -2.02
TRAJ17-201ENST00000390520 MIC13Q5XKP0 118 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms