RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 HPGDSO60760 199 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 HLA-DRB1P01911 266 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 SERPINE1P05121 402 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 NMBP08949 121 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 CCDC172P0C7W6 258 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 RPL12P30050 165 aaKnown RBP-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 EDDM3AQ14507 147 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 WFDC2Q14508 124 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 FXYD3Q14802 87 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 TMEM14EPQ6UXP3 125 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 FUNDC1Q8IVP5 155 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 PDZD9Q8IXQ8 264 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 KRT222Q8N1A0 295 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 POP5Q969H6 163 aaKnown RBP-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 MSANTD3Q96H12 275 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 Q96NJ1 140 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 MAP1LC3AQ9H492 121 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 UCK1Q9HA47 277 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 SPANXB1Q9NS25 103 aaPredicted RBP-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 FBXO5Q9UKT4 447 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 TMEM56-RWDD3S4R434 201 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 MAP2P11137 1827 aaKnown RBP-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 AFDNP55196 1824 aaKnown RBP-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 HECW2Q9P2P5 1572 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 BSNQ9UPA5 3926 aa-0.62□□□□□ -2.51
SNORD28-201ENST00000384706 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 BIVM-ERCC5R4GMW8 1640 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 TNS1Q9HBL0 1735 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 TRAV27A0A087WT01 109 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 TRGV10A0A0A0MS01 117 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 A0A0J9YY99 117 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 A6NN06 94 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 EEF1E1-BLOC1S5C9J1V9 151 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 F2Z2F3 143 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 H7BYZ3 331 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 M0R3E3 92 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 NDUFS8O00217 210 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 CRYZL1O95825 349 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 IGHV3-33P01772 117 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 MPC1LP0DKB6 136 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 MYL12AP19105 171 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 SRP14P37108 136 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 RPL5P46777 297 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 RPS20P60866 119 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 RAB5BP61020 215 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 NAA20P61599 178 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 SNRPD2P62316 118 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 EIF5AP63241 154 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 RBM3P98179 157 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 PMAIP1Q13794 54 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 ANGPT1Q15389 498 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 SNCBQ16143 134 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 SDHAF4Q5VUM1 108 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 SPOPLQ6IQ16 392 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 S100A7AQ86SG5 101 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 ANKRD29Q8N6D5 301 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 C5orf56Q8N8D9 126 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 DDI1Q8WTU0 396 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 FAM172AQ8WUF8 416 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 C19orf60Q96EN9 201 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 TMEM14BQ9NUH8 114 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 C3orf18Q9UK00 162 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 ARL5AQ9Y689 179 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 PCLOQ9Y6V0 5065 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 PLCE1Q9P212 2302 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 NEO1Q92859 1461 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 PPRC1Q5VV67 1664 aaKnown RBP-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 CHD8Q9HCK8 2581 aa-0.63□□□□□ -2.51
SNORD28-201ENST00000384706 DSPPQ9NZW4 1301 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 MYH9P35579 1960 aaKnown RBP-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 TRPM7Q96QT4 1865 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 NUP155O75694 1391 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 NBDYA0A0U1RRE5 68 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 LOC101927531A0A1B0GV80 90 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 CXCR6O00574 342 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 PFDN6O15212 129 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 SLC16A4O15374 487 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 SSNA1O43805 119 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 IGLV1-51P01701 117 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 APOA1P02647 267 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 RBP1P09455 135 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 OR10J4P0C629 311 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 SMIM10L2AP0DMW4 78 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 SMIM10L2BP0DMW5 78 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 SRIP30626 198 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 RAB5CP51148 216 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 CARD18P57730 90 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 MYL5Q02045 173 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 KLKP1Q107X0 134 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 NEDD8Q15843 81 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 CLVS2Q5SYC1 327 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 ALKAL1Q6UXT8 129 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 FOXI2Q6ZQN5 318 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 LRRC18Q8N456 261 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 DNAJB3Q8WWF6 145 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 DSCR8Q96T75 97 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 DCUN1D5Q9BTE7 237 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 CCDC90BQ9GZT6 254 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 TMEM126AQ9H061 195 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 OR51I1Q9H343 314 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms