RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 S100A8P05109 93 aa9.38□□□□□ -0.91
USP3-202ENST00000380324 CBLN1P23435 193 aa9.38□□□□□ -0.91
USP3-202ENST00000380324 CDX1P47902 265 aaPredicted RBP9.38□□□□□ -0.91
USP3-202ENST00000380324 TMEM183BQ1AE95 376 aa9.38□□□□□ -0.91
USP3-202ENST00000380324 PIFOQ8TCI5 191 aa9.38□□□□□ -0.91
USP3-202ENST00000380324 TMEM68Q96MH6 324 aa9.38□□□□□ -0.91
USP3-202ENST00000380324 GPR61Q9BZJ8 451 aa9.38□□□□□ -0.91
USP3-202ENST00000380324 TRAPPC1Q9Y5R8 145 aa9.38□□□□□ -0.91
USP3-202ENST00000380324 B4DSR2 109 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 H3BUX3 64 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 AMY1AP04745 511 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 CTSGP08311 255 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 ADMP35318 185 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 CMTM2Q8TAZ6 248 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 GNB4Q9HAV0 340 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 SCGB2A1O75556 95 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 AVPP01185 164 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 IGLC2P0DOY2 106 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 RPL15P61313 204 aaKnown RBP9.37□□□□□ -0.91
USP3-202ENST00000380324 BTF3L4Q96K17 158 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
USP3-202ENST00000380324 DOPEY2Q9Y3R5 2298 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 TRBV19A0A075B6N1 114 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 S100A9P06702 114 aaKnown RBP9.36□□□□□ -0.91
USP3-202ENST00000380324 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 HIST3H2BBQ8N257 126 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 CREBBPQ92793 2442 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 S100A2P29034 98 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 IER3P46695 156 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 DSCR9P59020 149 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 KRTAP10-9P60411 292 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 ZNF502Q8TBZ5 544 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 CCDC140Q96MF4 163 aa9.36□□□□□ -0.91
USP3-202ENST00000380324 CLEC3BP05452 202 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 SMIM6P0DI80 62 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 SLC25A16P16260 332 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 CLEC19AQ6UXS0 136 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 SIGLEC15Q6ZMC9 328 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 Q71RC1 249 aaPredicted RBP9.35□□□□□ -0.91
USP3-202ENST00000380324 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 GPR82Q96P67 336 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 GAR1Q9NY12 217 aaKnown RBP9.35□□□□□ -0.91
USP3-202ENST00000380324 PITPNC1Q9UKF7 332 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 NBPF19A0A087WUL8 3843 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 CHD6Q8TD26 2715 aa9.35□□□□□ -0.91
USP3-202ENST00000380324 TRBV9A0A0B4J1U6 114 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 TRAV41A0A0B4J266 112 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
USP3-202ENST00000380324 FABP4P15090 132 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 ASCL2Q99929 193 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 MEGF9Q9H1U4 602 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 M0R3E3 92 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 LTAP01374 205 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
USP3-202ENST00000380324 S100A7AQ86SG5 101 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 PRNTQ86SH4 94 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 Q86TA4 180 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 TXN2Q99757 166 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
USP3-202ENST00000380324 TRAV20A0A0B4J274 112 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 A0A1B0GUS0 222 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
USP3-202ENST00000380324 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 OR10D4PQ8NGN7 298 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 ZNF414Q96IQ9 312 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 CR1P17927 2039 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 BMPR1BO00238 502 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 PAX1P15863 534 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 EEF1AKMT3Q96AZ1 226 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 NOL4LQ96MY1 436 aaPredicted RBP9.33□□□□□ -0.92
USP3-202ENST00000380324 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
USP3-202ENST00000380324 RNF24Q9Y225 148 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
USP3-202ENST00000380324 APCP25054 2843 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 SMIM27A0A1W2PRY6 76 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 GRIFINA4D1Z8 144 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 RAB4BP61018 213 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 TOMM20LQ6UXN7 152 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 LINC00322Q6ZN03 302 aaPredicted RBP9.32□□□□□ -0.92
USP3-202ENST00000380324 FAM231DQ6ZW35 169 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 LINC01356Q8N9X3 169 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 IGHV3OR16-13A0A075B7E8 117 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 A0A096LNT2 108 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 IGHV3-74A0A0B4J1X5 117 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 IGHV3-66A0A0C4DH42 116 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 TGFAP01135 160 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 IGLV2-11P01706 119 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 TRGV3P03979 118 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 RPL7P18124 248 aaKnown RBP9.32□□□□□ -0.92
USP3-202ENST00000380324 CIARTQ8N365 385 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms