RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 C17orf77Q96MU5 243 aa11.52□□□□□ -0.56
RAB3IP-203ENST00000378809 RNF24Q9Y225 148 aa11.52□□□□□ -0.56
RAB3IP-203ENST00000378809 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.57
RAB3IP-203ENST00000378809 TRBV9A0A0B4J1U6 114 aa11.52□□□□□ -0.57
RAB3IP-203ENST00000378809 TCRAP04437 139 aa11.52□□□□□ -0.57
RAB3IP-203ENST00000378809 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.57
RAB3IP-203ENST00000378809 EEF1AKMT3Q96AZ1 226 aa11.52□□□□□ -0.57
RAB3IP-203ENST00000378809 OSTCQ9NRP0 149 aa11.52□□□□□ -0.57
RAB3IP-203ENST00000378809 RABAC1Q9UI14 185 aa11.52□□□□□ -0.57
RAB3IP-203ENST00000378809 ZNF705GA8MUZ8 300 aaPredicted RBP11.51□□□□□ -0.57
RAB3IP-203ENST00000378809 TYMSP04818 313 aa11.51□□□□□ -0.57
RAB3IP-203ENST00000378809 IGLC2P0DOY2 106 aa11.51□□□□□ -0.57
RAB3IP-203ENST00000378809 PITPNC1Q9UKF7 332 aa11.51□□□□□ -0.57
RAB3IP-203ENST00000378809 A0A096LNT2 108 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 A6NDX4 124 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 BMPR1BO00238 502 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 PHOX2AO14813 284 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 OR8I2Q8N0Y5 310 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 FMC1Q96HJ9 113 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 TCL1AP56279 114 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 ATP5G2Q06055 141 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 Q5PR19 223 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 GOLT1AQ6ZVE7 132 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 CCDC140Q96MF4 163 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 GAR1Q9NY12 217 aaKnown RBP11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
RAB3IP-203ENST00000378809 CA1P00915 261 aaPredicted RBP11.49□□□□□ -0.57
RAB3IP-203ENST00000378809 PRB4P10163 310 aaPredicted RBP11.49□□□□□ -0.57
RAB3IP-203ENST00000378809 PDZD11Q5EBL8 140 aa11.49□□□□□ -0.57
RAB3IP-203ENST00000378809 LINC00518Q8N0U6 118 aa11.49□□□□□ -0.57
RAB3IP-203ENST00000378809 GPR82Q96P67 336 aa11.49□□□□□ -0.57
RAB3IP-203ENST00000378809 KLF12Q9Y4X4 402 aa11.49□□□□□ -0.57
RAB3IP-203ENST00000378809 POLQO75417 2590 aa11.49□□□□□ -0.57
RAB3IP-203ENST00000378809 TRAV8-1A0A0A6YYK1 113 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 TRBV7-1A0A0A6YYK4 115 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 M0QZK8 103 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 SPINK4O60575 86 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 TRGV3P03979 118 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 S100A9P06702 114 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 RPL15P61313 204 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 TOMM20LQ6UXN7 152 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 ZNF414Q96IQ9 312 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 NOL4LQ96MY1 436 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 BEX4Q9NWD9 120 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 ANKRD17O75179 2603 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 RPL7P18124 248 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 HOXA5P20719 270 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 BLCAPP62952 87 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 SLC35B1P78383 322 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 LOXL1Q08397 574 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 KLK9Q2XQG4 91 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 SIGLEC15Q6ZMC9 328 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 AAMDCQ9H7C9 122 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 KLK9Q9UKQ9 250 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 CENPEQ02224 2701 aa11.48□□□□□ -0.57
RAB3IP-203ENST00000378809 TRAV9-1A0A075B6T8 112 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 J3QLI3 93 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 GATCO43716 136 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 S100A7P31151 101 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 TPPP2P59282 170 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 DEFB112Q30KQ8 113 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 LTAP01374 205 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 IGHG2P01859 326 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 IGF1P05019 195 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 LYPD1Q8N2G4 141 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 C12orf57Q99622 126 aa11.47□□□□□ -0.57
RAB3IP-203ENST00000378809 XKRY2A2RUG3 117 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 K7EQM0 130 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 IGHV4-59P01825 116 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 S100A8P05109 93 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 CBLN1P23435 193 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 CRIP2P52943 208 aaPredicted RBP11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 C19orf54Q5BKX5 351 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 Q86TA4 180 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
RAB3IP-203ENST00000378809 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 M0R3E3 92 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 IGHV4-31P0DP07 118 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 IER3P46695 156 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 RPL19P84098 196 aaKnown RBP11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 PDE6HQ13956 83 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 Q6ZS46 218 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 FAM231DQ6ZW35 169 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 Q96MF0 132 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 ZFAND3Q9H8U3 227 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 S100A2P29034 98 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 MEOX2P50222 304 aa11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 RELQ04864 619 aaPredicted RBP11.45□□□□□ -0.58
RAB3IP-203ENST00000378809 SMIM27A0A1W2PRY6 76 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 ZNF207O43670 478 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms