RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	SLC17A3	O00476	420 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	CA1	P00915	261 aa	Predicted RBP	10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	BMI1	P35226	326 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	C12orf54	Q6X4T0	127 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	DDB2	Q92466	427 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.66	□□□□□ -0.7
DDR1-225	ENST00000376568		G3V3Q6	166 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	GATC	O43716	136 aa	Known RBP	10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	NTF3	P20783	257 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	HLA-DMB	P28068	263 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	CHEK1	O14757	476 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	GPX1	P07203	203 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	MAS1L	P35410	378 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	TOMM20L	Q6UXN7	152 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	SGMS2	Q8NHU3	365 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	APC	P25054	2843 aa		10.66	□□□□□ -0.7
DDR1-225	ENST00000376568	ZNF98	A6NK75	572 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	C17orf77	Q96MU5	243 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	PEF1	Q9UBV8	284 aa	Known RBP	10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.65	□□□□□ -0.7
DDR1-225	ENST00000376568		J3QLI3	93 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	LY6G5B	Q8NDX9	201 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	OR10J6P	Q8NGY7	276 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	PARL	Q9H300	379 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	PRDM13	Q9H4Q3	707 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	ITGB1BP1	O14713	200 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	TGOLN2	O43493	480 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	NDUFA6	P56556	154 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	FAM74A4	Q5TZK3	123 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	KCNIP4	Q6PIL6	250 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568		Q9H3A6	140 aa		10.65	□□□□□ -0.7
DDR1-225	ENST00000376568	C7orf77	A4D0Y5	90 aa		10.64	□□□□□ -0.71
DDR1-225	ENST00000376568	ACTL10	Q5JWF8	245 aa		10.64	□□□□□ -0.71
DDR1-225	ENST00000376568	C1orf196	B1AJZ1	125 aa		10.64	□□□□□ -0.71
DDR1-225	ENST00000376568		F6UB75	175 aa		10.64	□□□□□ -0.71
DDR1-225	ENST00000376568	SPRY2	O43597	315 aa		10.64	□□□□□ -0.71
DDR1-225	ENST00000376568	KIAA1644	Q3SXP7	199 aa		10.64	□□□□□ -0.71
DDR1-225	ENST00000376568	C5orf56	Q8N8D9	126 aa		10.64	□□□□□ -0.71
DDR1-225	ENST00000376568		P01737	135 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	CITED2	Q99967	270 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	NCOR1P1	Q9H4R4	102 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	IGLV2-23	P01705	113 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	S100A9	P06702	114 aa	Known RBP	10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	FABP4	P15090	132 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	GPX4	P36969	197 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	MRAP	Q8TCY5	172 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	ID1	P41134	155 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	MORN5	Q5VZ52	161 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	ZNF343	Q6P1L6	599 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	C5orf17	Q8NAS9	161 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	RNF5	Q99942	180 aa		10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-225	ENST00000376568	NPIPB5	A8MRT5	1133 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	MGP	P08493	103 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	CENPW	Q5EE01	88 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	SMIM15	Q7Z3B0	74 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	BAGE3	Q86Y29	109 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	OR10G8	Q8NGN5	311 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	OR1N2	Q8NGR9	330 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	RNF2	Q99496	336 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	BIN3	Q9NQY0	253 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	GZMB	P10144	247 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	RNASE4	P34096	147 aa	Known RBP	10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	SNRPD3	P62318	126 aa	Known RBP	10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	PUSL1	Q8N0Z8	303 aa	Known RBP	10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	SAMD10	Q9BYL1	202 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	SMCO4	Q9NRQ5	59 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	NAT8B	Q9UHF3	227 aa		10.62	□□□□□ -0.71
DDR1-225	ENST00000376568	ERCC8	Q13216	396 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	RNF212	Q495C1	297 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	RNASE7	Q9H1E1	156 aa	Known RBP	10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	RPL29	P47914	159 aa	Known RBP	10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	USF2	Q15853	346 aa	Predicted RBP	10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	TCTEX1D4	Q5JR98	221 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	C18orf65	Q6ZTR6	163 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	MANBAL	Q9NQG1	85 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	FAM90A9P	A6NNJ1	464 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568		M0R381	172 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	GCG	P01275	180 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	IER3	P46695	156 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	DEFB131A	P59861	70 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	PGLYRP4	Q96LB8	373 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	NEU1	Q99519	415 aa		10.61	□□□□□ -0.71
DDR1-225	ENST00000376568	IGKV1OR2-108	A0A075B7D4	117 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	FAM209B	Q5JX69	171 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	ATRAID	Q6UW56	229 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	TMEM116	Q8NCL8	245 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	CLDN34	H7C241	214 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	PSMG3	Q9BT73	122 aa	Predicted RBP	10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	HIST1H1E	P10412	219 aa	Known RBP	10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	ZP3	P21754	424 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	SIGLEC15	Q6ZMC9	328 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	C1QL4	Q86Z23	238 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	AJUBA	Q96IF1	538 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	HIVEP1	P15822	2718 aa		10.6	□□□□□ -0.71
DDR1-225	ENST00000376568	SEC14L6	B5MCN3	397 aa		10.59	□□□□□ -0.71
DDR1-225	ENST00000376568	SPANXN1	Q5VSR9	72 aa		10.59	□□□□□ -0.71
DDR1-225	ENST00000376568	FAM71F2	Q6NXP2	309 aa		10.59	□□□□□ -0.71
DDR1-225	ENST00000376568	CLRN3	Q8NCR9	226 aa		10.59	□□□□□ -0.71
DDR1-225	ENST00000376568	CFHR4	Q92496	578 aa		10.59	□□□□□ -0.71

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