RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 OR5B12Q96R08 314 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 CHRDL1Q9BU40 450 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 GAR1Q9NY12 217 aaKnown RBP9.75□□□□□ -0.85
PRPF4-202ENST00000374199 MDFIC2A0A1B0GVS7 189 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 ZNF785A8K8V0 405 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 S100A6P06703 90 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 DEFB113Q30KQ7 82 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 GNG7O60262 68 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 BRD3OSQ6XYD6 125 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 S100A7AQ86SG5 101 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 LINC00469Q8N7U9 141 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 OR2J3O76001 311 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 IL4P05112 153 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 IGHV4-31P0DP07 118 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 C15orf32Q32M92 178 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 CT83Q5H943 113 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 BPIFA4PQ86YQ2 179 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 LEMD1Q68G75 181 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 UNQ5815/PRO19632Q6UWF5 114 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 OR5T1Q8NG75 326 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 WIPF2Q8TF74 440 aaPredicted RBP9.74□□□□□ -0.85
PRPF4-202ENST00000374199 LINC00479Q96M42 142 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 SMAD5-AS1Q9Y6J3 95 aa9.74□□□□□ -0.85
PRPF4-202ENST00000374199 CNN1P51911 297 aaKnown RBP9.73□□□□□ -0.85
PRPF4-202ENST00000374199 TRAV41A0A0B4J266 112 aa9.73□□□□□ -0.85
PRPF4-202ENST00000374199 IGHG4P01861 327 aa9.73□□□□□ -0.85
PRPF4-202ENST00000374199 TRGC1P0CF51 173 aa9.73□□□□□ -0.85
PRPF4-202ENST00000374199 RHOGP84095 191 aa9.73□□□□□ -0.85
PRPF4-202ENST00000374199 SOX21Q9Y651 276 aaPredicted RBP9.73□□□□□ -0.85
PRPF4-202ENST00000374199 G3V318 75 aa9.73□□□□□ -0.85
PRPF4-202ENST00000374199 CDX1P47902 265 aaPredicted RBP9.73□□□□□ -0.85
PRPF4-202ENST00000374199 GPR82Q96P67 336 aa9.73□□□□□ -0.85
PRPF4-202ENST00000374199 AURKAIP1Q9NWT8 199 aaPredicted RBP9.73□□□□□ -0.85
PRPF4-202ENST00000374199 SCGB2A1O75556 95 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 FABP9Q0Z7S8 132 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 C1orf194Q5T5A4 169 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 PGPA6NDG6 321 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 OR2T8A6NH00 312 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 RANP62826 216 aaKnown RBP9.72□□□□□ -0.85
PRPF4-202ENST00000374199 GNG5P63218 68 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 OR5I1Q13606 314 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 Q86TA4 180 aa9.72□□□□□ -0.85
PRPF4-202ENST00000374199 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.71□□□□□ -0.85
PRPF4-202ENST00000374199 SERTM2A0A1B0GWG4 89 aa9.71□□□□□ -0.85
PRPF4-202ENST00000374199 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
PRPF4-202ENST00000374199 PPP5D1E7EU14 171 aa9.71□□□□□ -0.85
PRPF4-202ENST00000374199 SLC17A3O00476 420 aa9.71□□□□□ -0.85
PRPF4-202ENST00000374199 TMEM183AQ8IXX5 376 aa9.71□□□□□ -0.85
PRPF4-202ENST00000374199 EEF1AKMT3Q96AZ1 226 aa9.71□□□□□ -0.85
PRPF4-202ENST00000374199 IER3P46695 156 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 RAB9AP51151 201 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 TMEM219Q86XT9 240 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 LURAP1LQ8IV03 231 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 BUB3O43684 328 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 S100A8P05109 93 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 RPEL1Q2QD12 228 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 Q56UQ5 140 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 TOMM20LQ6UXN7 152 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 HIST3H2BBQ8N257 126 aa9.71□□□□□ -0.86
PRPF4-202ENST00000374199 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.7□□□□□ -0.864e-9■■■■□ 22.1
PRPF4-202ENST00000374199 PDZD2O15018 2839 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 PLA2G2AP14555 144 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 TMUB1Q9BVT8 246 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 RNASE7Q9H1E1 156 aaKnown RBP9.7□□□□□ -0.86
PRPF4-202ENST00000374199 PITPNC1Q9UKF7 332 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 DIRC3C9JPN6 131 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 H3BUX3 64 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 IBA57Q5T440 356 aaKnown RBP9.7□□□□□ -0.86
PRPF4-202ENST00000374199 MYOZ3Q8TDC0 251 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 USMG5Q96IX5 58 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 GNB1LQ9BYB4 327 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 GFRA4Q9GZZ7 299 aa9.7□□□□□ -0.86
PRPF4-202ENST00000374199 APCP25054 2843 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 IGHV3OR16-10A0A075B7F0 116 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 A0A1W2PPQ1 181 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 FAM231BA6NCW3 169 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 SLC25A5P05141 298 aaKnown RBP9.69□□□□□ -0.86
PRPF4-202ENST00000374199 S100A7P31151 101 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
PRPF4-202ENST00000374199 ECSCRQ19T08 205 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 BAGE2Q86Y30 109 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 OR4F17Q8NGA8 305 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 GRAMD2BQ96HH9 432 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 RABAC1Q9UI14 185 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 FBLL1A6NHQ2 334 aaKnown RBP9.69□□□□□ -0.86
PRPF4-202ENST00000374199 BMPR1BO00238 502 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 SMIM6P0DI80 62 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 LINC00322Q6ZN03 302 aaPredicted RBP9.69□□□□□ -0.86
PRPF4-202ENST00000374199 BLNKQ8WV28 456 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 CLEC3BP05452 202 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 ESDP10768 282 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 RPL7P18124 248 aaKnown RBP9.69□□□□□ -0.86
PRPF4-202ENST00000374199 ERVFC1-1P60608 527 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 PSG9Q00887 426 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 COX19Q49B96 90 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 Q6YL49 198 aa9.69□□□□□ -0.86
PRPF4-202ENST00000374199 Q8N2B8 174 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms