RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 VSTM2AQ8TAG5 236 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 RPP21Q9H633 154 aaKnown RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 ST20Q9HBF5 79 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 B4GALT7Q9UBV7 327 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 SLC25A10Q9UBX3 287 aaPredicted RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 PILRBQ9UKJ0 227 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 EP300Q09472 2414 aaPredicted RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 CNOT1A5YKK6 2376 aaKnown RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 AKAP13Q12802 2813 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 IGHV3OR16-8A0A075B7F1 116 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 A0A096LNJ9 63 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 TRGV8A0A0C4DH27 118 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 UPK2O00526 184 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 NKX2-8O15522 239 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 FCN3O75636 299 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 OR2J3O76001 311 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 LTAP01374 205 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 P01737 135 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 HIST1H1EP10412 219 aaKnown RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 CACNG7P62955 275 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 PRCDQ00LT1 54 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 CD69Q07108 199 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 RAB30Q15771 203 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 RTL8BQ17RB0 113 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 TMEM97Q5BJF2 176 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 IGFL4Q6B9Z1 124 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 GOLT1AQ6ZVE7 132 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 RBMXL3Q8N7X1 1067 aaKnown RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 C9orf106Q8NAJ2 232 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 DEFB104AQ8WTQ1 72 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 NEU4Q8WWR8 484 aaPredicted RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 SRSF12Q8WXF0 261 aaKnown RBP4.33□□□□□ -1.72
ATG4A-204ENST00000372246 HARBI1Q96MB7 349 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 MAP1LC3CQ9BXW4 147 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 TMEM191AQ9H0A3 160 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 EPDR1Q9UM22 224 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 MED13LQ71F56 2210 aa4.33□□□□□ -1.72
ATG4A-204ENST00000372246 VPS13CQ709C8 3753 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 PPIAL4EA0A075B759 164 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 IGKV2D-26A0A0A0MRZ7 120 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 TRGV5A0A0B4J1U4 118 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 PPIAL4CA0A0B4J2A2 164 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 IGHV1-18A0A0C4DH31 117 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 PRR33A8MZF0 331 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 K7ERU9 68 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 M0R3E3 92 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 OVOL3O00110 214 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 CD5LO43866 347 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 TSPAN13O95857 204 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 PPIAL4FP0DN26 164 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 FGF6P10767 208 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 FCGR2BP31994 310 aaPredicted RBP4.32□□□□□ -1.72
ATG4A-204ENST00000372246 TAS2R45P59539 299 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 PDPNQ86YL7 162 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 BPIFA4PQ86YQ2 179 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 H1FXQ92522 213 aaKnown RBP4.32□□□□□ -1.72
ATG4A-204ENST00000372246 JPT1Q9UK76 154 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 SIT1Q9Y3P8 196 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 INSIG2Q9Y5U4 225 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 CSMD2Q7Z408 3487 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 A0A0G2JLM5 398 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.32□□□□□ -1.72
ATG4A-204ENST00000372246 A8MWL6 223 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 M0R1B8 84 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 OR5AL1P0C617 328 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 PPIFP30405 207 aaKnown RBP4.32□□□□□ -1.72
ATG4A-204ENST00000372246 INSL3P51460 131 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 CCL8P80075 99 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 HIST1H1AQ02539 215 aaPredicted RBP4.32□□□□□ -1.72
ATG4A-204ENST00000372246 SAMD13Q5VXD3 122 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 UFSP1Q6NVU6 142 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 FAM71F2Q6NXP2 309 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 AMTNQ6UX39 209 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 SH2D6Q7Z4S9 175 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 AMN1Q8IY45 258 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 WIPF2Q8TF74 440 aaPredicted RBP4.32□□□□□ -1.72
ATG4A-204ENST00000372246 C8orf49Q96NF6 230 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 ZNF747Q9BV97 191 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 Q9H3A6 140 aa4.32□□□□□ -1.72
ATG4A-204ENST00000372246 DSCAML1Q8TD84 2053 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 TRAV26-1A0A087WT03 109 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 D6R8Y8 96 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 G3V4G9 280 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 C16orf97H3BN30 126 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 CRXO43186 299 aaPredicted RBP4.31□□□□□ -1.72
ATG4A-204ENST00000372246 LAMTOR5O43504 91 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 ENSAO43768 121 aaKnown RBP4.31□□□□□ -1.72
ATG4A-204ENST00000372246 PPIAL4GP0DN37 164 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 COX8AP10176 69 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 KIR2DL2P43627 348 aaPredicted RBP4.31□□□□□ -1.72
ATG4A-204ENST00000372246 FXYD2P54710 66 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 PAX2Q02962 417 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 PMS2CLQ68D20 193 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 INO80CQ6PI98 192 aaPredicted RBP4.31□□□□□ -1.72
ATG4A-204ENST00000372246 C12orf54Q6X4T0 127 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 TMEM75Q8N9X5 138 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms