RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 ZNRD1Q9P1U0 126 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 A0A0J9YY99 117 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE7O76087 117 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE12FP0CL80 117 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE12GP0CL81 117 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE12IP0CL82 117 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 RPL36AP83881 106 aaKnown RBP7.98□□□□□ -1.13
COL4A6-202ENST00000372216 RPL36ALQ969Q0 106 aaKnown RBP7.98□□□□□ -1.13
COL4A6-202ENST00000372216 GSN-AS1Q9NRJ2 163 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 A0A1B0GV90 55 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 FAM223BA6NKX1 122 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 FAM223AQ8IWN6 122 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 NAA38Q9BRA0 125 aaKnown RBP7.97□□□□□ -1.13
COL4A6-202ENST00000372216 WFDC1Q9HC57 220 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 DKK4Q9UBT3 224 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 LINC00205P59089 165 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 TCF15Q12870 199 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 SS18Q15532 418 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 ZNF581Q9P0T4 197 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 NLRC5Q86WI3 1866 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 MAP1BP46821 2468 aaKnown RBP7.97□□□□□ -1.13
COL4A6-202ENST00000372216 SMKR1H3BMG3 65 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 PSG1P11464 419 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 NKAPP1Q8N9T2 125 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 PROK2Q9HC23 129 aa7.97□□□□□ -1.13
COL4A6-202ENST00000372216 ARHGEF17Q96PE2 2063 aaPredicted RBP7.96□□□□□ -1.13
COL4A6-202ENST00000372216 IFITM2Q01629 132 aa7.96□□□□□ -1.13
COL4A6-202ENST00000372216 ID3Q02535 119 aa7.96□□□□□ -1.13
COL4A6-202ENST00000372216 SPATA31B1PQ5VZV4 182 aa7.96□□□□□ -1.13
COL4A6-202ENST00000372216 DTX1Q86Y01 620 aa7.96□□□□□ -1.13
COL4A6-202ENST00000372216 PRTN3P24158 256 aa7.96□□□□□ -1.13
COL4A6-202ENST00000372216 USMG5Q96IX5 58 aa7.96□□□□□ -1.13
COL4A6-202ENST00000372216 A0A1B0GWJ7 208 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 GATA3P23771 443 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 ARTNQ5T4W7 220 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 C14orf178Q8N769 122 aaPredicted RBP7.96□□□□□ -1.14
COL4A6-202ENST00000372216 SPXQ9BT56 116 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 TNFSF13O75888 250 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 PFN2P35080 140 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 SIGLEC9Q9Y336 463 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 ASXL3Q9C0F0 2248 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 TRAV12-2A0A075B6T6 113 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 IGKV1OR2-108A0A075B7D4 117 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 LY6G6FQ5SQ64 297 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 ZNF562Q6V9R5 426 aa7.96□□□□□ -1.14
COL4A6-202ENST00000372216 LINC00473A8K010 186 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 OVOL3O00110 214 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 IGKCP01834 107 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 CLPSL1A2RUU4 121 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 ITGB1BP1O14713 200 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 NXPH4O95158 308 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 CCL20P78556 96 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 PRB2P02812 416 aaPredicted RBP7.95□□□□□ -1.14
COL4A6-202ENST00000372216 GAGE6Q13070 117 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 TEX43Q6ZNM6 134 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 IGF2BP2-AS1Q96M15 143 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 LINC01619G3V211 115 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 DPM2O94777 84 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 SPINK13Q1W4C9 94 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 GBF1Q92538 1859 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 TRBV6-6A0A0A6YYG2 114 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 ZNF98A6NK75 572 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 TMEM256Q8N2U0 113 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 DERL1Q9BUN8 251 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 CSTL1Q9H114 145 aa7.95□□□□□ -1.14
COL4A6-202ENST00000372216 CD5P06127 495 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 PEF1Q9UBV8 284 aaKnown RBP7.94□□□□□ -1.14
COL4A6-202ENST00000372216 A0A1W2PRE2 83 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 VWC2LB2RUY7 222 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 RPL23P62829 140 aaKnown RBP7.94□□□□□ -1.14
COL4A6-202ENST00000372216 CR1LQ2VPA4 569 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 TRGV9Q99603 122 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 WDR83OSQ9Y284 106 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 IGHV4-4A0A075B6R2 117 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 MAJINQ3KP22 176 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 IGFBPL1Q8WX77 278 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 MGST2Q99735 147 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 HEATR5BQ9P2D3 2071 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 TRAV8-3A0A0A6YYJ7 113 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 IGHV1-69DA0A0B4J2H0 117 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 H0YIZ8 118 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 IGHV1-69P01742 117 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 UBE2E1P51965 193 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 IGHV2-70DA0A0C4DH43 119 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 A8MXK9 166 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 IGKV1-5P01602 117 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 UBE2BP63146 152 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 LAGE3Q14657 143 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 MS4A6AQ9H2W1 248 aa7.94□□□□□ -1.14
COL4A6-202ENST00000372216 SNHG12Q9BXW3 62 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 MEGF9Q9H1U4 602 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 CLDN16Q9Y5I7 305 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 CACNA1IQ9P0X4 2223 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 IGKV2D-24A0A075B6R9 120 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms