RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MDS2Q8NDY4 140 aa11.58□□□□□ -0.56
RAPGEF1-202ENST00000372190 TM4SF5O14894 197 aa11.58□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGFBP3P17936 291 aaPredicted RBP11.58□□□□□ -0.56
RAPGEF1-202ENST00000372190 TRGV11A0A075B6L2 103 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGKV1D-43A0A0B4J1Z2 117 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 TAL2Q16559 108 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 BVES-AS1Q5T3Y7 98 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 PRIMA1Q86XR5 153 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 FOXG1P55316 489 aaPredicted RBP11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 SEC16AO15027 2179 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 NTN5Q8WTR8 489 aaPredicted RBP11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 CHCHD5Q9BSY4 110 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 VWA8A3KMH1 1905 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 CKAP5Q14008 2032 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 A0A1B0GTI1 187 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 TRGV3P03979 118 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 CEACAM8P31997 349 aaPredicted RBP11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 RNF126Q9BV68 326 aa11.57□□□□□ -0.56
RAPGEF1-202ENST00000372190 VDAC2P45880 294 aaPredicted RBP11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 C6orf226Q5I0X4 101 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 TMEM158Q8WZ71 300 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 AGMATQ9BSE5 352 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 ANK1P16157 1881 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGKV1D-33P01593 117 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGKV1-33P01594 117 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 LYNX1G3V0Z9 82 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 LYNX1P0DP58 116 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 Q0VG73 95 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 hADV29S1A0JD25 119 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 PROB1E7EW31 1015 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 TCRAP04437 139 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 EFNA4P52798 201 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 C1QL2Q7Z5L3 287 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 C20orf173Q96LM9 149 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 PRO1854Q9UHT4 67 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 SIP14410 1827 aa11.56□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGHV2-26A0A0B4J1V2 119 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGHV3-66A0A0C4DH42 116 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 VCYO14598 125 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 STPG4Q8N801 248 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 ZIC4Q8N9L1 334 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 SVILO95425 2214 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 FRMPD3Q5JV73 1810 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGHV3OR16-13A0A075B7E8 117 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGHV3-74A0A0B4J1X5 117 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 COLCA1Q6ZS62 124 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 OSR1Q8TAX0 266 aaPredicted RBP11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 CRLF1O75462 422 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 HLA-DMBP28068 263 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 CEND1Q8N111 149 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 REG4Q9BYZ8 158 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 LY96Q9Y6Y9 160 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 FAM90A1Q86YD7 464 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 ZCCHC24Q8N2G6 241 aaKnown RBP11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 LY6G5BQ8NDX9 201 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 PEMTQ9UBM1 199 aa11.55□□□□□ -0.56
RAPGEF1-202ENST00000372190 FAM166AQ6J272 317 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 COX8AP10176 69 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 PSMB8P28062 276 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 MP68P56378 58 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 ITLN2Q8WWU7 325 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 SHISA9B4DS77 424 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 IGHV3-35A0A0C4DH35 117 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 TRAV1-1A0A0B4J248 108 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 C21orf62Q9NYP8 219 aa11.54□□□□□ -0.56
RAPGEF1-202ENST00000372190 PPIFP30405 207 aaKnown RBP11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 PRR30Q53SZ7 412 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 TRAV40A0A0B4J280 105 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 RS1O15537 224 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 LINC00114Q6XXX2 140 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 C18orf12Q96KH6 178 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 BRWD1Q9NSI6 2320 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 SRSF2Q01130 221 aaKnown RBP11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 SLC25A28Q96A46 364 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 MST1P26927 711 aa11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
RAPGEF1-202ENST00000372190 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.56
RAPGEF1-202ENST00000372190 FXYD7P58549 80 aa11.52□□□□□ -0.56
RAPGEF1-202ENST00000372190 C1orf195Q5TG92 126 aa11.52□□□□□ -0.56
RAPGEF1-202ENST00000372190 TRGV4A0A0C4DH28 118 aa11.52□□□□□ -0.56
RAPGEF1-202ENST00000372190 PIKFYVEQ9Y2I7 2098 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 TINCRA0A1B0GVN0 87 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 RPL39P5Q59GN2 51 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 PVRIGQ6DKI7 326 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 GGNQ86UU5 652 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 LINC00312Q9Y6C7 94 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 ZNF876PQ49A33 203 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 LYL1P12980 280 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 NUP35Q8NFH5 326 aa11.52□□□□□ -0.57
RAPGEF1-202ENST00000372190 TRAV12-2A0A075B6T6 113 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 SIVA1O15304 175 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 C8orf86Q6ZUL3 223 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms