RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 CALYQ9NYX4 217 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 TMEM213A2RRL7 107 aa9.62□□□□□ -0.87
PTPN1-201ENST00000371621 KLF12Q9Y4X4 402 aa9.62□□□□□ -0.87
PTPN1-201ENST00000371621 INSL3P51460 131 aa9.62□□□□□ -0.87
PTPN1-201ENST00000371621 TANC2Q9HCD6 1990 aa9.62□□□□□ -0.87
PTPN1-201ENST00000371621 NPIPB11E5RHQ5 1161 aa9.62□□□□□ -0.87
PTPN1-201ENST00000371621 Q6ZR03 302 aa9.62□□□□□ -0.87
PTPN1-201ENST00000371621 TRAV8-4A0A0B4J246 113 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 LTAP01374 205 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 COX6CP09669 75 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 CCL4P13236 92 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 LYZL1Q6UWQ5 148 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 SCGB3A1Q96QR1 104 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 CCL13Q99616 98 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 DYNLRB1Q9NP97 96 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 KIAA1671Q9BY89 1806 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 KLRC4-KLRK1H3BQV0 150 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 SIVA1O15304 175 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 SLC25A53Q5H9E4 307 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 Q8N976 141 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 TRBV7-9A0A0J9YWB2 115 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 C15orf61A6NNL5 157 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 TCRAP04437 139 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 IFITM1P13164 125 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF295-AS1Q8N0V1 137 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 SCNM1Q9BWG6 230 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 ACACAQ13085 2346 aa9.61□□□□□ -0.87
PTPN1-201ENST00000371621 MGST3O14880 152 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 COX7A1P24310 79 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 TMEM42Q69YG0 159 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 REV3LO60673 3130 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 PRR33A8MZF0 331 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 C12orf74Q32Q52 190 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 FOXI2Q6ZQN5 318 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 OSR1Q8TAX0 266 aaPredicted RBP9.6□□□□□ -0.87
PTPN1-201ENST00000371621 COL4A3Q01955 1670 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 IGHV3-64A0A075B6Q5 118 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 C9orf172C9J069 976 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 ATP5LO75964 103 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 PRB3Q04118 309 aaPredicted RBP9.6□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF56Q15929 161 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 CCL17Q92583 94 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 YAE1D1Q9NRH1 226 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
PTPN1-201ENST00000371621 CHCHD2Q9Y6H1 151 aaPredicted RBP9.6□□□□□ -0.87
PTPN1-201ENST00000371621 LINC00271P0C7V0 271 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 CD69Q07108 199 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 SLC25A48Q6ZT89 311 aaKnown RBP9.59□□□□□ -0.87
PTPN1-201ENST00000371621 TMEM158Q8WZ71 300 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 FBXL15Q9H469 300 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 SRSF6Q13247 344 aaKnown RBP9.59□□□□□ -0.87
PTPN1-201ENST00000371621 ABHD17AQ96GS6 310 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 VCX2Q9H322 139 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 TCRBV4S1A1TA0A5B7 111 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 IGLL5B9A064 214 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.59□□□□□ -0.87
PTPN1-201ENST00000371621 KLF14Q8TD94 323 aaPredicted RBP9.59□□□□□ -0.87
PTPN1-201ENST00000371621 C11orf52Q96A22 123 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 VWCEQ96DN2 955 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 SIGLEC8Q9NYZ4 499 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 TRBV25-1A0A075B6N4 114 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 IGHV1OR15-9A0A0B4J2B8 117 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 CXCL12P48061 93 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 C9orf153Q5TBE3 101 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 ASCL4Q6XD76 172 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 Q6ZPA2 131 aa9.59□□□□□ -0.87
PTPN1-201ENST00000371621 TRAV2A0A0B4J234 112 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 LGALS3P17931 250 aaKnown RBP9.58□□□□□ -0.88
PTPN1-201ENST00000371621 PPP1R27Q86WC6 154 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 M0R381 172 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 SSBP2P81877 361 aaPredicted RBP9.58□□□□□ -0.88
PTPN1-201ENST00000371621 GDF5OSQ5U4N7 250 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 CEND1Q8N111 149 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 NACAE9PAV3 2078 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 RPL27AP46776 148 aaKnown RBP9.58□□□□□ -0.88
PTPN1-201ENST00000371621 ZNF329Q86UD4 541 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 PSG8Q9UQ74 426 aa9.58□□□□□ -0.88
PTPN1-201ENST00000371621 NOTCH4Q99466 2003 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 SAA1P0DJI8 122 aaPredicted RBP9.57□□□□□ -0.88
PTPN1-201ENST00000371621 SAA2P0DJI9 122 aaPredicted RBP9.57□□□□□ -0.88
PTPN1-201ENST00000371621 CHD9Q3L8U1 2897 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 NXPH1P58417 271 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 FOXI1Q12951 378 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 HES7Q9BYE0 225 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 JPT1Q9UK76 154 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 ANAPC1Q9H1A4 1944 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 LINC01545Q5VT33 79 aa9.57□□□□□ -0.88
PTPN1-201ENST00000371621 PMS2P5A8MQ11 134 aa9.56□□□□□ -0.88
PTPN1-201ENST00000371621 WDR31Q8NA23 367 aa9.56□□□□□ -0.88
PTPN1-201ENST00000371621 TRGV5A0A0B4J1U4 118 aa9.56□□□□□ -0.88
PTPN1-201ENST00000371621 HLA-DRB4P13762 266 aa9.56□□□□□ -0.88
PTPN1-201ENST00000371621 CCL8P80075 99 aa9.56□□□□□ -0.88
PTPN1-201ENST00000371621 Q6ZS49 121 aa9.56□□□□□ -0.88
PTPN1-201ENST00000371621 HLA-DRB4X5D2U9 266 aa9.56□□□□□ -0.88
PTPN1-201ENST00000371621 EML6Q6ZMW3 1958 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms