RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 VWCEQ96DN2 955 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 FER1L5A0AVI2 2057 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 CSRP1P21291 193 aaKnown RBP10.43□□□□□ -0.74
GPC4-201ENST00000370828 ASCL2Q99929 193 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 FAM90A9PA6NNJ1 464 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 C16orf97H3BN30 126 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 KLRD1Q13241 179 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 C19orf54Q5BKX5 351 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 CACNA1GO43497 2377 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 CDX4O14627 284 aaPredicted RBP10.42□□□□□ -0.74
GPC4-201ENST00000370828 FAM106CPP0CH98 169 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 CCL3L1P16619 93 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 FAM106AQ4KMX7 169 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 AMN1Q8IY45 258 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 ARPC1AQ92747 370 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 PYGO2Q9BRQ0 406 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 A0A1W2PR77 199 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 IQCF6A8MYZ5 107 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 ID1P41134 155 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 SRSF2Q01130 221 aaKnown RBP10.42□□□□□ -0.74
GPC4-201ENST00000370828 PRB3Q04118 309 aaPredicted RBP10.42□□□□□ -0.74
GPC4-201ENST00000370828 TMEM30BQ3MIR4 351 aa10.42□□□□□ -0.74
GPC4-201ENST00000370828 PLCE1Q9P212 2302 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 SS18L1O75177 396 aaPredicted RBP10.41□□□□□ -0.74
GPC4-201ENST00000370828 SPACA3Q8IXA5 215 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 ZNF524Q96C55 264 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 ABCA7Q8IZY2 2146 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 LOC102723996A0A087X1L8 192 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 IGLV3-32A0A0A0MS00 114 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 H3BMM0 161 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 IGHV1-24A0A0C4DH33 117 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 PRR33A8MZF0 331 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 LGALS1P09382 135 aaKnown RBP10.41□□□□□ -0.74
GPC4-201ENST00000370828 COX8AP10176 69 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 Q6ZS49 121 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 C9JAW5 83 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 PPP1R17O96001 155 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 NPPCP23582 126 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
GPC4-201ENST00000370828 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
GPC4-201ENST00000370828 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 CEACAM4O75871 244 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 RBM3P98179 157 aaKnown RBP10.4□□□□□ -0.74
GPC4-201ENST00000370828 PAPPA-AS1Q5QFB9 102 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 PPP1R32Q7Z5V6 425 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 DEFB104AQ8WTQ1 72 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 PMS2P5A8MQ11 134 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 KLK10O43240 276 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 IGKV3-20P01619 116 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 ARMS2P0C7Q2 107 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 Q6ZT83 130 aa10.4□□□□□ -0.74
GPC4-201ENST00000370828 CENPVQ7Z7K6 275 aaPredicted RBP10.4□□□□□ -0.74
GPC4-201ENST00000370828 M0QXV9 152 aa10.4□□□□□ -0.75
GPC4-201ENST00000370828 IGLC1P0CG04 106 aa10.4□□□□□ -0.75
GPC4-201ENST00000370828 PDLIM4P50479 330 aa10.4□□□□□ -0.75
GPC4-201ENST00000370828 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.75
GPC4-201ENST00000370828 BRK1Q8WUW1 75 aa10.4□□□□□ -0.75
GPC4-201ENST00000370828 SUMO2P61956 95 aaKnown RBP10.39□□□□□ -0.75
GPC4-201ENST00000370828 RHOGP84095 191 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 ODF1Q14990 250 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 METRNQ9UJH8 293 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 AMTNQ6UX39 209 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 TMEM158Q8WZ71 300 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 C21orf62Q9NYP8 219 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 TRPM7Q96QT4 1865 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 TRAV21A0A0B4J279 112 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
GPC4-201ENST00000370828 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
GPC4-201ENST00000370828 H3BMG7 143 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 K7ERJ3 54 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 ZNF329Q86UD4 541 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 C8orf46Q8TAG6 207 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 FAM110AQ9BQ89 295 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 XIRP1Q702N8 1843 aaKnown RBP10.38□□□□□ -0.75
GPC4-201ENST00000370828 PI4KAP42356 2102 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 TRBV6-6A0A0A6YYG2 114 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 IMMP1LQ96LU5 166 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 IGKV2-40A0A087WW87 121 aaPredicted RBP10.38□□□□□ -0.75
GPC4-201ENST00000370828 IGKV2D-40P01614 121 aaPredicted RBP10.38□□□□□ -0.75
GPC4-201ENST00000370828 LAGE3Q14657 143 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 Q6P435 159 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 ZC2HC1AQ96GY0 325 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 IGHV1-2P23083 117 aa10.38□□□□□ -0.75
GPC4-201ENST00000370828 TM4SF5O14894 197 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 CFHR2P36980 270 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 ORMDL2Q53FV1 153 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 EBLN2Q6P2I7 272 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 ZNF71Q9NQZ8 489 aaPredicted RBP10.37□□□□□ -0.75
GPC4-201ENST00000370828 SIP14410 1827 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 SPTBN2O15020 2390 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 GGTLC3B5MD39 225 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 SMRP1Q8NCR6 262 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 C1orf162Q8NEQ5 155 aaPredicted RBP10.37□□□□□ -0.75
GPC4-201ENST00000370828 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms