RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SAA2-SAA4A0A096LPE2 208 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 IGHV3OR16-9A0A0B4J2B5 98 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 IZUMO1RA6ND01 250 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 OOSP1A8MZH6 123 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 C9JAW5 83 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 NMBP08949 121 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 LINC00694P0DN24 101 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 RCC1P18754 421 aaPredicted RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 SLC25A26Q70HW3 274 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 CMSS1Q9BQ75 279 aaKnown RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 HDHD3Q9BSH5 251 aaPredicted RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 BET1LQ9NYM9 111 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 HIGD1AQ9Y241 93 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 EP300Q09472 2414 aaPredicted RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 FAM208BQ5VWN6 2430 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 DCHS2Q6V1P9 2916 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 DMXL2Q8TDJ6 3036 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 LYZL6O75951 148 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 CA6P23280 308 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 NFYAP23511 347 aaPredicted RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 LCE2AQ5TA79 106 aaPredicted RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 AMMECR1LQ6DCA0 310 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 TMUB2Q71RG4 321 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 C6orf223Q8N319 242 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 OR5H2Q8NGV7 314 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 MBD3L1Q8WWY6 194 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 HSD17B10Q99714 261 aaKnown RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 BANF2Q9H503 90 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 C3orf85A0A1B0GTC6 90 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 KRBOX1C9JBD0 128 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 H0Y9J4 135 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 SEC11BP0C7V7 166 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 SPINK2P20155 84 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 GUCA1AP43080 201 aaPredicted RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 BSPH1Q075Z2 132 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 OR2T2Q6IF00 324 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 GFRALQ6UXV0 394 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 FRZBQ92765 325 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 RBPMSQ93062 196 aaKnown RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 CBLN4Q9NTU7 201 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 ZNF230Q9UIE0 474 aaPredicted RBP2.97□□□□□ -1.93
MCF2-203ENST00000370576 CEP250Q9BV73 2442 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 GPR179Q6PRD1 2367 aa2.97□□□□□ -1.93
MCF2-203ENST00000370576 A0A0G2JRQ6 117 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 TRBV6-1A0A0K0K1D8 114 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 TEX50A0A1B0GTY4 177 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 WI2-2373I1.2A0A1W2PRP0 233 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 ISLRO14498 428 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 PRRG2O14669 202 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 PMP2P02689 132 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 HOXA5P20719 270 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 VDAC1P21796 283 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 RPL29P47914 159 aaKnown RBP2.96□□□□□ -1.94
MCF2-203ENST00000370576 SUB1P53999 127 aaKnown RBP eCLIP2.96□□□□□ -1.94
MCF2-203ENST00000370576 FAM201AQ5SY85 155 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 OR5A1Q8NGJ0 315 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 MED28Q9H204 178 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 JPT2Q9H910 190 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 PKIGQ9Y2B9 76 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 CACNA1BQ00975 2339 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 MAP1BP46821 2468 aaKnown RBP2.96□□□□□ -1.94
MCF2-203ENST00000370576 NBEAQ8NFP9 2946 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 IGSF10Q6WRI0 2623 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 PDZD2O15018 2839 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 ODAMA1E959 279 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 CDK2AP2O75956 126 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 UBE2NP61088 152 aaKnown RBP2.96□□□□□ -1.94
MCF2-203ENST00000370576 GNG5P63218 68 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 NSUN5P1Q3KNT7 163 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 SCGB2B2Q4G0G5 96 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 IBA57Q5T440 356 aaKnown RBP2.96□□□□□ -1.94
MCF2-203ENST00000370576 SGPP2Q8IWX5 399 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 DRAM1Q8N682 238 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 PARP11Q9NR21 331 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 COX11Q9Y6N1 276 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 LAMA5O15230 3695 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 ARFGEF3Q5TH69 2177 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 EPG5Q9HCE0 2579 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 A6NIN4 97 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 H7C1H1 209 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 ANGPTL7O43827 346 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 CFDP00746 253 aaPredicted RBP2.96□□□□□ -1.94
MCF2-203ENST00000370576 OR9G9P0C7N8 305 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 FGF6P10767 208 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 ATP6V0CP27449 155 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 PAX8Q06710 450 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 ZFP69Q49AA0 526 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 Q6ZRM9 215 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 OR51G1Q8NGK1 321 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 MYOZ3Q8TDC0 251 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 NEUROG1Q92886 237 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 FAM104AQ969W3 186 aa2.96□□□□□ -1.94
MCF2-203ENST00000370576 NBPF19A0A087WUL8 3843 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 INTS1Q8N201 2190 aaKnown RBP2.95□□□□□ -1.94
MCF2-203ENST00000370576 SNURFLB1AK76 121 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 J3QKU1 62 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 RPL30P62888 115 aaKnown RBP2.95□□□□□ -1.94
MCF2-203ENST00000370576 ARFRP1Q13795 201 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 DIAPH2-AS1Q14236 149 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms