RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PRR31Q5SQ13 230 aa15.94■□□□□ 0.14
LMO4-202ENST00000370544 TRAV12-3A0A0B4J271 114 aa15.94■□□□□ 0.14
LMO4-202ENST00000370544 ACTL10Q5JWF8 245 aa15.94■□□□□ 0.14
LMO4-202ENST00000370544 Q6ZR03 302 aa15.94■□□□□ 0.14
LMO4-202ENST00000370544 A0A1W2PPI3 338 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 ADARB2-AS1A8MUL3 147 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 HIST3H2BBQ8N257 126 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 PLXNA4Q9HCM2 1894 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 TSPAN13O95857 204 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 KLHL30-AS1Q8NEE0 82 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 ZNF524Q96C55 264 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 TMEM8BA6NDV4 472 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 TYMSP04818 313 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 RUSC1-AS1Q66K80 236 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 CRPP02741 224 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 C5orf30Q96GV9 206 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 NCOR1O75376 2440 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 LINC01549A6NIU2 74 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 NUP35Q8NFH5 326 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 RHPN1-AS1Q9BWJ2 59 aa15.93■□□□□ 0.14
LMO4-202ENST00000370544 NHP2Q9NX24 153 aaKnown RBP15.93■□□□□ 0.14
LMO4-202ENST00000370544 H3BUT2 72 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 CEACAM8P31997 349 aaPredicted RBP15.92■□□□□ 0.14
LMO4-202ENST00000370544 SSC4DQ8WTU2 575 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 IGHV3-73A0A0B4J1V6 119 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 LCNL1Q6ZST4 164 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 DTX2Q86UW9 622 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 RSPO3Q9BXY4 272 aaPredicted RBP15.92■□□□□ 0.14
LMO4-202ENST00000370544 NDUFAF3Q9BU61 184 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 SPTBN2O15020 2390 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 ZNF503-AS2A6NEH8 195 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 ZNF815PA8K554 130 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 UBE2E1P51965 193 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 SP5Q6BEB4 398 aaPredicted RBP15.92■□□□□ 0.14
LMO4-202ENST00000370544 PRADC1Q9BSG0 188 aa15.92■□□□□ 0.14
LMO4-202ENST00000370544 FXYD7P58549 80 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 TRAV8-1A0A0A6YYK1 113 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 MSMBP08118 114 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 ZNF415Q09FC8 603 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 MYLKQ15746 1914 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 SHANK2-AS3Q9BTD1 123 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 TANC1Q9C0D5 1861 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 WDR86Q86TI4 376 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 DTX1Q86Y01 620 aa15.91■□□□□ 0.14
LMO4-202ENST00000370544 TRAV2A0A0B4J234 112 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 AMBPP02760 352 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 LINC00469Q8N7U9 141 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 SMPXQ9UHP9 88 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 C1orf147Q96MC9 270 aaPredicted RBP15.9■□□□□ 0.14
LMO4-202ENST00000370544 DPH3P1Q9H4G8 78 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 ANAPC10Q9UM13 185 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 RNF223E7ERA6 249 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 CD300EQ496F6 205 aaPredicted RBP15.9■□□□□ 0.14
LMO4-202ENST00000370544 ZNF562Q6V9R5 426 aa15.9■□□□□ 0.14
LMO4-202ENST00000370544 PTPRDP23468 1912 aa15.89■□□□□ 0.14
LMO4-202ENST00000370544 OR9G4Q8NGQ1 327 aa15.89■□□□□ 0.14
LMO4-202ENST00000370544 DAZ1Q9NQZ3 744 aaKnown RBP15.89■□□□□ 0.14
LMO4-202ENST00000370544 TP53BP1Q12888 1972 aaPredicted RBP15.89■□□□□ 0.14
LMO4-202ENST00000370544 TRGV1A0A0A0MS02 117 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 A6NNC1 897 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 LINC00587B1AMM8 73 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 SLC25A2Q9BXI2 301 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 RPL35AP18077 110 aaKnown RBP15.89■□□□□ 0.13
LMO4-202ENST00000370544 LINC01559Q495D7 138 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 OVOL3O00110 214 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 ZNF876PQ49A33 203 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 ZNF833PQ6ZTB9 187 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 TMEM14BQ9NUH8 114 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 MPDZO75970 2070 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 IGHV3-64A0A075B6Q5 118 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 GATA3P23771 443 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 Q86TA4 180 aa15.89■□□□□ 0.13
LMO4-202ENST00000370544 DMRTA1Q5VZB9 504 aa15.88■□□□□ 0.13
LMO4-202ENST00000370544 ATP6V0E1O15342 81 aa15.88■□□□□ 0.13
LMO4-202ENST00000370544 TMEM249Q2WGJ8 235 aa15.88■□□□□ 0.13
LMO4-202ENST00000370544 FAM110DQ8TAY7 271 aaPredicted RBP15.88■□□□□ 0.13
LMO4-202ENST00000370544 NCOR1P1Q9H4R4 102 aa15.88■□□□□ 0.13
LMO4-202ENST00000370544 DUX4L9Q6RFH8 374 aaPredicted RBP15.88■□□□□ 0.13
LMO4-202ENST00000370544 PLXNA2O75051 1894 aa15.87■□□□□ 0.13
LMO4-202ENST00000370544 WDR81Q562E7 1941 aa15.87■□□□□ 0.13
LMO4-202ENST00000370544 INTS1Q8N201 2190 aaKnown RBP15.87■□□□□ 0.13
LMO4-202ENST00000370544 PLNP26678 52 aa15.87■□□□□ 0.13
LMO4-202ENST00000370544 C17orf58Q2M2W7 97 aa15.87■□□□□ 0.13
LMO4-202ENST00000370544 INSP01308 110 aa15.87■□□□□ 0.13
LMO4-202ENST00000370544 SFTA2Q6UW10 78 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 NDUFA4L2Q9NRX3 87 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 RPL36AP83881 106 aaKnown RBP15.86■□□□□ 0.13
LMO4-202ENST00000370544 RPL36ALQ969Q0 106 aaKnown RBP15.86■□□□□ 0.13
LMO4-202ENST00000370544 HOXA3O43365 443 aaPredicted RBP15.86■□□□□ 0.13
LMO4-202ENST00000370544 ORAOV1Q8WV07 137 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 E9PQ18 207 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 IGLV1-44P01699 117 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 SYNJ2BPP57105 145 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 ERCC8Q13216 396 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 PDE6HQ13956 83 aa15.86■□□□□ 0.13
LMO4-202ENST00000370544 IGHV4-39P01824 125 aa15.85■□□□□ 0.13
LMO4-202ENST00000370544 MS4A6AQ9H2W1 248 aa15.85■□□□□ 0.13
LMO4-202ENST00000370544 IGHV1-69DA0A0B4J2H0 117 aa15.85■□□□□ 0.13
LMO4-202ENST00000370544 IGHV1-69P01742 117 aa15.85■□□□□ 0.13
LMO4-202ENST00000370544 Q5PR19 223 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms