RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NDUFS6O75380 124 aaKnown RBP10.33□□□□□ -0.76
HCFC1-202ENST00000369984 KIR3DS1Q14943 382 aa10.33□□□□□ -0.76
HCFC1-202ENST00000369984 PLPPR1Q8TBJ4 325 aa10.33□□□□□ -0.76
HCFC1-202ENST00000369984 C2orf16Q68DN1 1984 aa10.33□□□□□ -0.76
HCFC1-202ENST00000369984 OR9G9P0C7N8 305 aa10.33□□□□□ -0.76
HCFC1-202ENST00000369984 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
HCFC1-202ENST00000369984 ZNF837Q96EG3 531 aaPredicted RBP10.33□□□□□ -0.76
HCFC1-202ENST00000369984 GUSBP1Q15486 140 aa10.33□□□□□ -0.76
HCFC1-202ENST00000369984 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 NEUROG3Q9Y4Z2 214 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 PRSS22Q9GZN4 317 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 TNS1Q9HBL0 1735 aaKnown RBP10.32□□□□□ -0.76
HCFC1-202ENST00000369984 A0A1B0GTI1 187 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 LHBP01229 141 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 hDV102S1A0JD36 115 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 PRCDQ00LT1 54 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 EGR2P11161 476 aaPredicted RBP10.32□□□□□ -0.76
HCFC1-202ENST00000369984 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 CXCL1P09341 107 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 HCFC1P51610 2035 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 LINC00271P0C7V0 271 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 RPL15P61313 204 aaKnown RBP10.32□□□□□ -0.76
HCFC1-202ENST00000369984 RASL11AQ6T310 242 aa10.32□□□□□ -0.76
HCFC1-202ENST00000369984 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 METRNQ9UJH8 293 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 NDUFS5O43920 106 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 OVOL1O14753 267 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 AMBPP02760 352 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 TEX43Q6ZNM6 134 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 WFDC1Q9HC57 220 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
HCFC1-202ENST00000369984 SLC25A48Q6ZT89 311 aaKnown RBP10.31□□□□□ -0.76
HCFC1-202ENST00000369984 RCHY1Q96PM5 261 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 TRAV12-1A0A0B4J245 112 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 ACTL10Q5JWF8 245 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 ZNF474Q6S9Z5 364 aaPredicted RBP10.31□□□□□ -0.76
HCFC1-202ENST00000369984 SLC25A39Q9BZJ4 359 aaPredicted RBP10.31□□□□□ -0.76
HCFC1-202ENST00000369984 ZNF319Q9P2F9 582 aa10.31□□□□□ -0.76
HCFC1-202ENST00000369984 NCOA6Q14686 2063 aaPredicted RBP10.31□□□□□ -0.76
HCFC1-202ENST00000369984 MBNL3Q9NUK0 354 aaKnown RBP10.3□□□□□ -0.76
HCFC1-202ENST00000369984 CHKB-CPT1BH3BT56 60 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 TFF1P04155 84 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 C3orf36Q3SXR2 165 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 ERCC8Q13216 396 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 LY6G6FQ5SQ64 297 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
HCFC1-202ENST00000369984 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 LYZL4Q96KX0 146 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 MRPS18CQ9Y3D5 142 aaKnown RBP10.3□□□□□ -0.76
HCFC1-202ENST00000369984 NDUFC2O95298 119 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 FXYD7P58549 80 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 WBP1Q96G27 269 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 DSCR8Q96T75 97 aa10.3□□□□□ -0.76
HCFC1-202ENST00000369984 CDKN1AP38936 164 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 CD5P06127 495 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 ATP6V0BQ99437 205 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 A0A0A6YYD4 124 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 LTBRP36941 435 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 C15orf32Q32M92 178 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 LINC00114Q6XXX2 140 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 NCOR1P1Q9H4R4 102 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 VSIRQ9H7M9 311 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 CEACAM1P13688 526 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 NUP35Q8NFH5 326 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 SS18Q15532 418 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 RASL10AQ92737 203 aa10.29□□□□□ -0.76
HCFC1-202ENST00000369984 COL4A1P02462 1669 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 TCRAP04437 139 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 C9orf106Q8NAJ2 232 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 C11orf44Q8N8P7 122 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 RPRMLQ8N4K4 120 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 TIMM23O14925 209 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 GREM1O60565 184 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 WNT2P09544 360 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 NABP1Q96AH0 204 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 UBL5Q9BZL1 73 aa10.28□□□□□ -0.76
HCFC1-202ENST00000369984 SOCS3O14543 225 aa10.27□□□□□ -0.76
HCFC1-202ENST00000369984 SELLP14151 372 aa10.27□□□□□ -0.76
HCFC1-202ENST00000369984 C1orf194Q5T5A4 169 aa10.27□□□□□ -0.76
HCFC1-202ENST00000369984 RNASE6Q93091 150 aaKnown RBP10.27□□□□□ -0.76
HCFC1-202ENST00000369984 TREML4Q6UXN2 200 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 PRRC2AP48634 2157 aaKnown RBP10.27□□□□□ -0.77
HCFC1-202ENST00000369984 KLF17Q5JT82 389 aaPredicted RBP10.27□□□□□ -0.77
HCFC1-202ENST00000369984 LYZL1Q6UWQ5 148 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 C3orf56Q8N813 242 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 TRAV40A0A0B4J280 105 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 TRGV1A0A0A0MS02 117 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 IGHG3P01860 377 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 THAP8Q8NA92 274 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 TMEM190Q8WZ59 177 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 TRBV20-1A0A075B6N2 111 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 SRSF8Q9BRL6 282 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms