RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ZNF833PQ6ZTB9 187 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 CANT1Q8WVQ1 401 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 ZHX1-C8orf76Q96EF9 292 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 LINC00052Q96N35 136 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 PAIP2Q9BPZ3 127 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 GGACTQ9BVM4 153 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 ASB4Q9Y574 426 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 ZFC3H1O60293 1989 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 MED12Q93074 2177 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 TET1Q8NFU7 2136 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 TRAV10A0A0B4J240 114 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 IGHV1-58A0A0C4DH39 117 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 PIAS1O75925 651 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 HLA-EP13747 358 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 DSCR4P56555 118 aaPredicted RBP0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 EIF5AL1Q6IS14 154 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 KRTAP26-1Q6PEX3 210 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 OR5D14Q8NGL3 314 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 CDC26Q8NHZ8 85 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 POP5Q969H6 163 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 LINC00467Q9BRT7 94 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 PYCARDQ9ULZ3 195 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 LY96Q9Y6Y9 160 aa0.63□□□□□ -2.31
ECHDC1-201ENST00000368287 ASCC3Q8N3C0 2202 aaKnown RBP0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 ODAMA1E959 279 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 E7EUB6 86 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 G3V2T6 193 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 K7ERJ3 54 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 NUPR1O60356 82 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 ATG12O94817 140 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 ARPP19P56211 112 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 ARF6P62330 175 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 BASP1P80723 227 aaKnown RBP0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 PSG9Q00887 426 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 MSMO1Q15800 293 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 SNCBQ16143 134 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 C4orf22Q6V702 233 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 LINC00322Q6ZN03 302 aaPredicted RBP0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 TEX37Q96LM6 180 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 TP53RKQ96S44 253 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 PSTPIP2Q9H939 334 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 FREM3P0C091 2139 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 FANCMQ8IYD8 2048 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 MYLKQ15746 1914 aa0.62□□□□□ -2.31
ECHDC1-201ENST00000368287 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 DUXBA0A1W2PPF3 345 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 NCR3O14931 201 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 GGCTO75223 188 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 NDUFC2O95298 119 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 EFNA4P52798 201 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 TMBIM6P55061 237 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 SMIM20Q8N5G0 67 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 RAB37Q96AX2 223 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 ZC2HC1AQ96GY0 325 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 LYSMD1Q96S90 227 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 GPX7Q96SL4 187 aaPredicted RBP0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 POPDC3Q9HBV1 291 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 ORMDL1Q9P0S3 153 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 TNS3Q68CZ2 1445 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 COL24A1Q17RW2 1714 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 CECR2Q9BXF3 1484 aa0.61□□□□□ -2.31
ECHDC1-201ENST00000368287 H7C1C5 153 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 M0R233 179 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 MFSD11O43934 449 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 CSN2P05814 226 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 PHBP35232 272 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 LCN6P62502 163 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 CDK6Q00534 326 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 MYL5Q02045 173 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 TMEM14EPQ6UXP3 125 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 GRINAQ7Z429 371 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 OR4K15Q8NH41 348 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 CHCHD1Q96BP2 118 aaKnown RBP0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 HOPXQ9BPY8 73 aaPredicted RBP0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 GINS3Q9BRX5 216 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 TMEM14CQ9P0S9 112 aa0.6□□□□□ -2.31
ECHDC1-201ENST00000368287 F8W1H4 67 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 ERC2-IT1O76042 136 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 IFNA1P01562 189 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 TRGC2P03986 189 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 GNG3P63215 75 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 RPL19P84098 196 aaKnown RBP0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 AKR1C8PQ5T2L2 129 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 C2orf82Q6UX34 121 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 SBSPONQ8IVN8 264 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 OR5D16Q8NGK9 328 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 TMEM70Q9BUB7 260 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 OR2J1Q9GZK6 312 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 SH3BGRL3Q9H299 93 aa0.59□□□□□ -2.31
ECHDC1-201ENST00000368287 A0A087WSZ3 146 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 RIIAD1A6NNX1 92 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 CXCL8P10145 99 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 TAS2R41P59536 307 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 LYG2Q86SG7 212 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 GKN2Q86XP6 184 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 AP3S1Q92572 193 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 MUCL1Q96DR8 90 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 CARD19Q96LW7 228 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 ZNF714Q96N38 554 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms