RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ARFGEF3Q5TH69 2177 aa11.3□□□□□ -0.6
CD48-201ENST00000368045 ZNF292O60281 2723 aa11.3□□□□□ -0.6
CD48-201ENST00000368045 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
CD48-201ENST00000368045 HLA-DRB1P01911 266 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 APOHP02749 345 aaPredicted RBP11.29□□□□□ -0.6
CD48-201ENST00000368045 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
CD48-201ENST00000368045 PDE6HQ13956 83 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 LCN12Q6JVE5 192 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 SIGLEC15Q6ZMC9 328 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 ZGRF1Q86YA3 2104 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
CD48-201ENST00000368045 ZNF491Q8N8L2 437 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 LAMTOR2Q9Y2Q5 125 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 ROS1P08922 2347 aa11.29□□□□□ -0.6
CD48-201ENST00000368045 CEP250Q9BV73 2442 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 A6NNC1 897 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 NPIPB5A8MRT5 1133 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 ODF3BA8MYP8 253 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 RIGQ13278 110 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 BATFQ16520 125 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 Q56UQ5 140 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 FAM120AOSQ5T036 256 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.28□□□□□ -0.6
CD48-201ENST00000368045 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 A0A1B0GUT8 65 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 FAM90A27PA6NNH2 459 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 MRPS12O15235 138 aaKnown RBP11.28□□□□□ -0.6
CD48-201ENST00000368045 SIAH2O43255 324 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 LINC00614P0C842 121 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 PSG3Q16557 428 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
CD48-201ENST00000368045 OOSP1A8MZH6 123 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 PRTN3P24158 256 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 TSPOP30536 169 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 MFAP4P55083 255 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 LDLRAD2Q5SZI1 272 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 PKDREJQ9NTG1 2253 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 CFAP47Q6ZTR5 3102 aa11.27□□□□□ -0.61
CD48-201ENST00000368045 LOC105371242A0A075B767 164 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
CD48-201ENST00000368045 OVOL3O00110 214 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 IL4P05112 153 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 FOXC1Q12948 553 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 CCDC144NLQ6NUI1 221 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 C1orf122Q6ZSJ8 110 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 ZC2HC1AQ96GY0 325 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
CD48-201ENST00000368045 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
CD48-201ENST00000368045 ZNF785A8K8V0 405 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 GNG7O60262 68 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 SCGB2A1O75556 95 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 ARF6P62330 175 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
CD48-201ENST00000368045 IGFBPL1Q8WX77 278 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 CLEC5AQ9NY25 188 aa11.26□□□□□ -0.61
CD48-201ENST00000368045 MAP1BP46821 2468 aaKnown RBP11.25□□□□□ -0.61
CD48-201ENST00000368045 SYS1-DBNDD2H3BUS1 97 aa11.25□□□□□ -0.61
CD48-201ENST00000368045 TTC9CQ8N5M4 171 aa11.25□□□□□ -0.61
CD48-201ENST00000368045 KIR3DL3Q8N743 410 aa11.25□□□□□ -0.61
CD48-201ENST00000368045 AAMDCQ9H7C9 122 aa11.25□□□□□ -0.61
CD48-201ENST00000368045 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
CD48-201ENST00000368045 PLXNB1O43157 2135 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 IGLL1P15814 213 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
CD48-201ENST00000368045 PSG9Q00887 426 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 PET117Q6UWS5 81 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 ARPC1AQ92747 370 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 FANCD2OSQ96PS1 177 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 THYN1Q9P016 225 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 HSPB8Q9UJY1 196 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 ACACAQ13085 2346 aa11.24□□□□□ -0.61
CD48-201ENST00000368045 OR4C46A6NHA9 309 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 CCL21O00585 134 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 TOX4O94842 621 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 CT45A10P0DMU9 189 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 GRNP28799 593 aaKnown RBP11.23□□□□□ -0.61
CD48-201ENST00000368045 S100A7P31151 101 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 CSN1S1P47710 185 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 MAJINQ3KP22 176 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 MINOS1Q5TGZ0 78 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 C11orf71Q6IPW1 123 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 COX8CQ7Z4L0 72 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 C17orf77Q96MU5 243 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 MINOS1-NBL1R4GNA1 71 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 HES1Q14469 280 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 SPATA12Q7Z6I5 190 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 STPG4Q8N801 248 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms