RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 IGHG3P01860 377 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 CD55P08174 381 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 A6NNC1 897 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 TRAV41A0A0B4J266 112 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 RHODO00212 210 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 NDUFC2O95298 119 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 NCR2O95944 276 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 EGR2P11161 476 aaPredicted RBP10.28□□□□□ -0.76
TPR-201ENST00000367478 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
TPR-201ENST00000367478 MED13LQ71F56 2210 aa10.28□□□□□ -0.76
TPR-201ENST00000367478 SPSB2Q99619 263 aa10.27□□□□□ -0.76
TPR-201ENST00000367478 IGHV3OR16-8A0A075B7F1 116 aa10.27□□□□□ -0.76
TPR-201ENST00000367478 FAM223BA6NKX1 122 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 FAM223AQ8IWN6 122 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 C1orf159Q96HA4 380 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 PPIFP30405 207 aaKnown RBP10.27□□□□□ -0.77
TPR-201ENST00000367478 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 LIME1Q9H400 295 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 DEPPQ9NTK1 212 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 PSG1P11464 419 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 LYZL1Q6UWQ5 148 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
TPR-201ENST00000367478 A0A1B0GWJ7 208 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 COLCA2A8K830 154 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 ZNF561-AS1K7EIQ3 104 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 TREML4Q6UXN2 200 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 TMEM158Q8WZ71 300 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 ADAMTSL1Q8N6G6 1762 aa10.27□□□□□ -0.77
TPR-201ENST00000367478 SRSF2Q01130 221 aaKnown RBP10.26□□□□□ -0.77
TPR-201ENST00000367478 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.26□□□□□ -0.77
TPR-201ENST00000367478 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
TPR-201ENST00000367478 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
TPR-201ENST00000367478 IGHV1-2P23083 117 aa10.26□□□□□ -0.77
TPR-201ENST00000367478 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 GREM1O60565 184 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 PPP1R32Q7Z5V6 425 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 ZNF319Q9P2F9 582 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 IGKV2-40A0A087WW87 121 aaPredicted RBP10.25□□□□□ -0.77
TPR-201ENST00000367478 IGKV2D-40P01614 121 aaPredicted RBP10.25□□□□□ -0.77
TPR-201ENST00000367478 WBP1Q96G27 269 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 RPUSD1Q9UJJ7 312 aaKnown RBP10.25□□□□□ -0.77
TPR-201ENST00000367478 LOC101059948A0A1B0GTJ6 334 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 FAM231BA6NCW3 169 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 IGHG4P01861 327 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 TCRAP04437 139 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 EIF4EBP2Q13542 120 aaPredicted RBP10.25□□□□□ -0.77
TPR-201ENST00000367478 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
TPR-201ENST00000367478 SLAQ13239 276 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 CRIM1Q9NZV1 1036 aa10.25□□□□□ -0.77
TPR-201ENST00000367478 FAM27E3Q08E93 113 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 C1orf122Q6ZSJ8 110 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 THBDP07204 575 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 LCN12Q6JVE5 192 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 SPXQ9BT56 116 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 POU2AF1Q16633 256 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 SAP30O75446 220 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
TPR-201ENST00000367478 SH2D1AO60880 128 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 OR11H6Q8NGC7 330 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 C9orf118A6NHY6 69 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 H3BQ85 93 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 CXCL1P09341 107 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 EXOC3-AS1Q8N2X6 119 aa10.24□□□□□ -0.77
TPR-201ENST00000367478 TIMM23O14925 209 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 C3orf79P0CE67 100 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 LY6G6FQ5SQ64 297 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 ARHGAP32A7KAX9 2087 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 ZNF474Q6S9Z5 364 aaPredicted RBP10.23□□□□□ -0.77
TPR-201ENST00000367478 RMI2Q96E14 147 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 EREGO14944 169 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 SUPT4H1P63272 117 aaKnown RBP10.23□□□□□ -0.77
TPR-201ENST00000367478 LINC00114Q6XXX2 140 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 IGHV1-24A0A0C4DH33 117 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 SORL1Q92673 2214 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 IGKV1D-13A0A0B4J2D9 117 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 IGKV1-13P0DP09 117 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 ATP6V0BQ99437 205 aa10.23□□□□□ -0.77
TPR-201ENST00000367478 RBM3P98179 157 aaKnown RBP10.23□□□□□ -0.77
TPR-201ENST00000367478 ZNF362Q5T0B9 420 aaPredicted RBP10.23□□□□□ -0.77
TPR-201ENST00000367478 SRSF3P84103 164 aaKnown RBP10.22□□□□□ -0.77
TPR-201ENST00000367478 M0R1W7 72 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 NABP1Q96AH0 204 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 TRAV13-1A0A0B4J241 112 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 CCL3L1P16619 93 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 RNF114Q9Y508 228 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 MED13Q9UHV7 2174 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 TRBV25-1A0A075B6N4 114 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 TANC2Q9HCD6 1990 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 Q0VG73 95 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 TMEM75Q8N9X5 138 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 COL24A1Q17RW2 1714 aa10.22□□□□□ -0.77
TPR-201ENST00000367478 COL18A1P39060 1754 aa10.21□□□□□ -0.77
TPR-201ENST00000367478 IGHV2-26A0A0B4J1V2 119 aa10.21□□□□□ -0.77
TPR-201ENST00000367478 HAMPP81172 84 aa10.21□□□□□ -0.77
TPR-201ENST00000367478 CD33P20138 364 aa10.21□□□□□ -0.78
TPR-201ENST00000367478 RPL15P61313 204 aaKnown RBP10.21□□□□□ -0.78
TPR-201ENST00000367478 HLA-DMBP28068 263 aa10.21□□□□□ -0.78
TPR-201ENST00000367478 C14orf178Q8N769 122 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms