RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 C3orf36Q3SXR2 165 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 LINC01551Q86U37 167 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 NAA38Q9BRA0 125 aaKnown RBP6.06□□□□□ -1.44
SYNE1-208ENST00000367256 TIMM21Q9BVV7 248 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 MYO18BQ8IUG5 2567 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 CD5LO43866 347 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 SPINK8P0C7L1 97 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 PAX8Q06710 450 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 RBMY1FQ15415 496 aaKnown RBP6.06□□□□□ -1.44
SYNE1-208ENST00000367256 ABHD17AQ96GS6 310 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 KIR3DS1Q14943 382 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 C8orf46Q8TAG6 207 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 RASL10AQ92737 203 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 PTPRQQ9UMZ3 2332 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
SYNE1-208ENST00000367256 WFDC12Q8WWY7 111 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 TRAV8-3A0A0A6YYJ7 113 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 OR9G9P0C7N8 305 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 OCC1Q8TAD7 63 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 RCHY1Q96PM5 261 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 A0A087WX48 190 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 TRGV1A0A0A0MS02 117 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 CD33P20138 364 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 C15orf32Q32M92 178 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 BCL6BQ8N143 479 aaPredicted RBP6.06□□□□□ -1.44
SYNE1-208ENST00000367256 PSG8Q9UQ74 426 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 CTSBP07858 339 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 PPIFP30405 207 aaKnown RBP6.05□□□□□ -1.44
SYNE1-208ENST00000367256 LILRA1O75019 489 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 NDUFS6O75380 124 aaKnown RBP6.05□□□□□ -1.44
SYNE1-208ENST00000367256 SELLP14151 372 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 PPP1R32Q7Z5V6 425 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 SAP30O75446 220 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 DNAJC30Q96LL9 226 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 PRSS22Q9GZN4 317 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 GFRA4Q9GZZ7 299 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 CD55P08174 381 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 CFPP27918 469 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 ZNF474Q6S9Z5 364 aaPredicted RBP6.05□□□□□ -1.44
SYNE1-208ENST00000367256 Q6ZS49 121 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 A0A087X0K7 114 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 PRB4P10163 310 aaPredicted RBP6.05□□□□□ -1.44
SYNE1-208ENST00000367256 LSM4Q9Y4Z0 139 aaKnown RBP6.05□□□□□ -1.44
SYNE1-208ENST00000367256 MORN2Q502X0 79 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 TRBV6-6A0A0A6YYG2 114 aa6.05□□□□□ -1.44
SYNE1-208ENST00000367256 IGKV1D-13A0A0B4J2D9 117 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 CXCL1P09341 107 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 IGKV1-13P0DP09 117 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 ADAMTSL5Q6ZMM2 481 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 TRGV9Q99603 122 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 RSPO4Q2I0M5 234 aaPredicted RBP6.04□□□□□ -1.44
SYNE1-208ENST00000367256 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 WFDC1Q9HC57 220 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 TRBV20-1A0A075B6N2 111 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 TRAV41A0A0B4J266 112 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 GAGE12BA1L429 117 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 SRRM4A7MD48 611 aaKnown RBP6.04□□□□□ -1.44
SYNE1-208ENST00000367256 PYY3Q5JQD4 70 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 LYPD1Q8N2G4 141 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 CYTL1Q9NRR1 136 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 SYS1-DBNDD2H3BUS1 97 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 THBDP07204 575 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 IGHV1-2P23083 117 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 A8MWP6 167 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 Q0VG73 95 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 SPSB2Q99619 263 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 MBNL3Q9NUK0 354 aaKnown RBP6.04□□□□□ -1.44
SYNE1-208ENST00000367256 C9orf153Q5TBE3 101 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 EXOC3-AS1Q8N2X6 119 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 H3BMM0 161 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 TIAF1O95411 115 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 FAM27E3Q08E93 113 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 TMEM14EPQ6UXP3 125 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 FDCSPQ8NFU4 85 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 UBE2WQ96B02 151 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 ZNF625Q96I27 306 aaPredicted RBP6.04□□□□□ -1.44
SYNE1-208ENST00000367256 SPG11Q96JI7 2443 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 FAM231BA6NCW3 169 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 CSTL1Q9H114 145 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 ANAPC10Q9UM13 185 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 PTPRBP23467 1997 aa6.04□□□□□ -1.44
SYNE1-208ENST00000367256 WNT2P09544 360 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 LHX2P50458 406 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 NMSQ5H8A3 153 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 PRR31Q5SQ13 230 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 hDV102S1A0JD36 115 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 TMEM8BA6NDV4 472 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 C17orf100A8MU93 164 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 CD24P25063 80 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 DUTP33316 252 aaKnown RBP6.03□□□□□ -1.44
SYNE1-208ENST00000367256 NPIPB5A8MRT5 1133 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 TIMM23O14925 209 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 GAS1P54826 345 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 MESP2Q0VG99 397 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 CCL3L1P16619 93 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 SIGLEC12Q96PQ1 595 aa6.03□□□□□ -1.44
SYNE1-208ENST00000367256 SH2D1AO60880 128 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms