RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 CCL7P80098 99 aa0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 SPATA45Q537H7 98 aa0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 OR5AS1Q8N127 324 aa0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 SMR3AQ99954 134 aa0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 TCEAL2Q9H3H9 227 aaPredicted RBP0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 JPT1Q9UK76 154 aa0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 CCDC144AA2RUR9 1427 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 MED12Q93074 2177 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 A0A087WSZ3 146 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 M0R378 163 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 TAX1BP3O14907 124 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 CST8O60676 142 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 PRH1P02810 166 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 HLA-EP13747 358 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 KDELR1P24390 212 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 ATP5G3P48201 142 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 SPINK7P58062 85 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 VBP1P61758 197 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 IFT20Q8IY31 132 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 ATOH7Q8N100 152 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 OR5D16Q8NGK9 328 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 STAG3L4Q8TBR4 150 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 NPCDR1Q9BY65 106 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 ARL2BPQ9Y2Y0 163 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 FAM32AQ9Y421 112 aaKnown RBP0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 NUP98P52948 1817 aa0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
RNU6-428P-201ENST00000362942 TRAV27A0A087WT01 109 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 JMJD7-PLA2G4BH0Y9G9 81 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 K7EIL1 84 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 HMGB3O15347 200 aaKnown RBP0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 RAB5CP51148 216 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 FOXA3P55318 350 aaPredicted RBP0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 GOLT1AQ6ZVE7 132 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 OR10X1Q8NGY0 326 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 RAB37Q96AX2 223 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 CCDC94Q9BW85 323 aaPredicted RBP0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 WFDC10AQ9H1F0 79 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 ENY2Q9NPA8 101 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
RNU6-428P-201ENST00000362942 A0A0D9SG42 100 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 AIPO00170 330 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 PPYP01298 95 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 DYNLT3P51808 116 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 CIRBPQ14011 172 aaKnown RBP0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 TSKUQ8WUA8 353 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 POP5Q969H6 163 aaKnown RBP0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 UCK1Q9HA47 277 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 ARL5AQ9Y689 179 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 FSIP2Q5CZC0 6907 aa0.22□□□□□ -2.37
RNU6-428P-201ENST00000362942 MYO5AQ9Y4I1 1855 aaKnown RBP0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 TRAV23DV6A0A075B6W5 121 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 TRBV30A0A0K0K1B3 111 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 SERPINA1P01009 418 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 IFNA4P05014 189 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 SERPINB9P50453 376 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 ZNF137PP52743 207 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 HSPE1P61604 102 aaKnown RBP0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 SCGB2B2Q4G0G5 96 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 ARPINQ7Z6K5 226 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 S100A7AQ86SG5 101 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 Q8TAT8 98 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 ZC2HC1AQ96GY0 325 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 HYLS1Q96M11 299 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 ZNF714Q96N38 554 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 PRAP1Q96NZ9 151 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 OPTCQ9UBM4 332 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 NCAPD3P42695 1498 aa0.21□□□□□ -2.38
RNU6-428P-201ENST00000362942 FANCMQ8IYD8 2048 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 TMEM256-PLSCR3K7ERE1 68 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 BANF1O75531 89 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 NDUFC2O95298 119 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 CST2P09228 141 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 NFYBP25208 207 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 SPINT3P49223 89 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 TAF1AQ15573 450 aaPredicted RBP0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 C1orf134Q5TEV5 83 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 LRRC18Q8N456 261 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 OR4K15Q8NH41 348 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 CHCHD1Q96BP2 118 aaKnown RBP0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 GGACTQ9BVM4 153 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 POPDC3Q9HBV1 291 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 BOKQ9UMX3 212 aaPredicted RBP0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 ZFYVE9O95405 1425 aa0.2□□□□□ -2.38
RNU6-428P-201ENST00000362942 ASCC3Q8N3C0 2202 aaKnown RBP0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 MGAMO43451 1857 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 NUP210LQ5VU65 1888 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 A0A096LPI6 279 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 DUXBA0A1W2PPF3 345 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 LYRM1O43325 122 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 IFNA14P01570 189 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 APOA2P02652 100 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 C6orf52Q5T4I8 152 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 LINC00299Q6ZSB3 139 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 PPTC7Q8NI37 304 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 PHB2Q99623 299 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 C9orf16Q9BUW7 83 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 MAP1LC3BQ9GZQ8 125 aa0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 CACYBPQ9HB71 228 aaKnown RBP0.19□□□□□ -2.38
RNU6-428P-201ENST00000362942 RFX7Q2KHR2 1363 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms