RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 C15orf65H3BRN8 121 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 Q1RN00 199 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 DEFB112Q30KQ8 113 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 FER1L6-AS1Q8NA97 138 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 ABCA2Q9BZC7 2435 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 FLNBO75369 2602 aaKnown RBP5.68□□□□□ -1.5
RAB5B-201ENST00000360299 LEPP41159 167 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 KRTAP10-9P60411 292 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 SRSF2Q01130 221 aaKnown RBP5.68□□□□□ -1.5
RAB5B-201ENST00000360299 C17orf58Q2M2W7 97 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 TMEM136Q6ZRR5 245 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 UBE2DNLQ8IWF7 75 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 TRAV21A0A0B4J279 112 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 A0A0G2JRQ6 117 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 IGKV3-20P01619 116 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 PPBPP02775 128 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 BTF3P20290 206 aaKnown RBP5.68□□□□□ -1.5
RAB5B-201ENST00000360299 AGMATQ9BSE5 352 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 SELENOKQ9Y6D0 94 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 TRBV24-1A0A075B6N3 115 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 NUDT3O95989 172 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 ATP5L2Q7Z4Y8 100 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 SLC25A39Q9BZJ4 359 aaPredicted RBP5.68□□□□□ -1.5
RAB5B-201ENST00000360299 TRBV20OR9-2A0A075B6H5 130 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 F2Z2F3 143 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 CBLN1P23435 193 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 OR4C46A6NHA9 309 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 TOMM40O96008 361 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 SCGB1C2P0DMR2 95 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 PYYP10082 97 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 FBXL19-AS1Q494R0 122 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 TEX38Q6PEX7 206 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 C9orf139Q6ZV77 190 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 LYPD6Q86Y78 171 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 LINC01549A6NIU2 74 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 SLC17A3O00476 420 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 CD5LO43866 347 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 IGKV1-16P04430 117 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 CACNG7P62955 275 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 PDE6HQ13956 83 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 OCC1Q8TAD7 63 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 NDUFA4L2Q9NRX3 87 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 TNRC6AQ8NDV7 1962 aaKnown RBP5.67□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV3OR16-8A0A075B7F1 116 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 ATP5LO75964 103 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV2-5P01817 119 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 RASL11AQ6T310 242 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 ORMDL3Q8N138 153 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 PRELID3AQ96N28 172 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 NEU1Q99519 415 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 VSIRQ9H7M9 311 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 PAM16Q9Y3D7 125 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 PRRC2AP48634 2157 aaKnown RBP5.67□□□□□ -1.5
RAB5B-201ENST00000360299 HIGD1CA8MV81 97 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 NDUFB8O95169 186 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 RPL13AP40429 203 aaKnown RBP5.67□□□□□ -1.5
RAB5B-201ENST00000360299 SRSF9Q13242 221 aaKnown RBP eCLIP5.67□□□□□ -1.5
RAB5B-201ENST00000360299 KIAA1644Q3SXP7 199 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 C5orf24Q7Z6I8 188 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 TSKUQ8WUA8 353 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 SMIM12Q96EX1 92 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 PMCHL2Q9BQD1 86 aa5.67□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV3-66A0A0C4DH42 116 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 YPEL3P61236 119 aaPredicted RBP5.66□□□□□ -1.5
RAB5B-201ENST00000360299 GCSAMLQ5JQS6 135 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 SIGLEC15Q6ZMC9 328 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 TMEM170AQ8WVE7 144 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 GNB1LQ9BYB4 327 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 NUP210LQ5VU65 1888 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV4-59P01825 116 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 LDLRAD2Q5SZI1 272 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF841Q6ZN19 808 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 ERASQ7Z444 233 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 C11orf53Q8IXP5 236 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 PRRC2CQ9Y520 2896 aaKnown RBP5.66□□□□□ -1.5
RAB5B-201ENST00000360299 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 A6NJY4 79 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 LHBP01229 141 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF56Q15929 161 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 PIP4P2Q8N4L2 257 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 UBE2L6O14933 153 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 MCRIP2Q9BUT9 160 aaKnown RBP5.66□□□□□ -1.5
RAB5B-201ENST00000360299 ZMAT4Q9H898 229 aa5.66□□□□□ -1.5
RAB5B-201ENST00000360299 SEPSECSQ9HD40 501 aaKnown RBP5.66□□□□□ -1.5
RAB5B-201ENST00000360299 PCNX3Q9H6A9 2034 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 A0A1W2PPI3 338 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 ATRAIDQ6UW56 229 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 REC114Q7Z4M0 266 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 COPS9Q8WXC6 57 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 MALRD1Q5VYJ5 2156 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 ADAMTS20P59510 1910 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 A0A1B0GUS0 222 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 TCRAP04437 139 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 HOXA5P20719 270 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 SRSF3P84103 164 aaKnown RBP5.65□□□□□ -1.5
RAB5B-201ENST00000360299 PRSS57Q6UWY2 283 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 GTF2H5Q6ZYL4 71 aa5.65□□□□□ -1.5
RAB5B-201ENST00000360299 LINC00477Q96M19 166 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms