RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 SERF1AO75920 110 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 C1QL4Q86Z23 238 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 RALGAPA1Q6GYQ0 2036 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 D6R8Y8 96 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 F8VVB4 439 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 F8VWA3 439 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 LHBP01229 141 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 RFNGQ9Y644 331 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 C14orf178Q8N769 122 aaPredicted RBP10.53□□□□□ -0.72
NLRC3-202ENST00000359128 DOCK6Q96HP0 2047 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 AZU1P20160 251 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 WFDC1Q9HC57 220 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 NHP2Q9NX24 153 aaKnown RBP10.53□□□□□ -0.72
NLRC3-202ENST00000359128 LEPROTO15243 131 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 MDC1Q14676 2089 aaKnown RBP10.53□□□□□ -0.72
NLRC3-202ENST00000359128 LYPD1Q8N2G4 141 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
NLRC3-202ENST00000359128 CARHSP1Q9Y2V2 147 aaKnown RBP10.52□□□□□ -0.72
NLRC3-202ENST00000359128 MPZP25189 248 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 SSBP2P81877 361 aaPredicted RBP10.52□□□□□ -0.73
NLRC3-202ENST00000359128 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 LINC00473A8K010 186 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 MS4A6AQ9H2W1 248 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 TCF20Q9UGU0 1960 aaKnown RBP10.52□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE12JA6NER3 117 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE1Q13065 139 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE4Q13068 117 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE5Q13069 117 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE13Q4V321 117 aa10.52□□□□□ -0.73
NLRC3-202ENST00000359128 DKK1O94907 266 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 MTURNQ8N3F0 131 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 RPL32P62910 135 aaKnown RBP10.51□□□□□ -0.73
NLRC3-202ENST00000359128 SMPXQ9UHP9 88 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 TRBV25-1A0A075B6N4 114 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 TRPT1Q86TN4 253 aaKnown RBP10.51□□□□□ -0.73
NLRC3-202ENST00000359128 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 Q8TCH9 128 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 ERG28Q9UKR5 140 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 TRBV6-6A0A0A6YYG2 114 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 LINC01559Q495D7 138 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 TMEM170AQ8WVE7 144 aa10.51□□□□□ -0.73
NLRC3-202ENST00000359128 SPINK13Q1W4C9 94 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 ZNF362Q5T0B9 420 aaPredicted RBP10.5□□□□□ -0.73
NLRC3-202ENST00000359128 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
NLRC3-202ENST00000359128 WISP1O95388 367 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 TCTEX1D4Q5JR98 221 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 RASL11AQ6T310 242 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 ZSWIM8A7E2V4 1837 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 SVILO95425 2214 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 PAX9P55771 341 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 BRWD1Q9NSI6 2320 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 CEP290O15078 2479 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 DEFB113Q30KQ7 82 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 FNDC1Q4ZHG4 1894 aaPredicted RBP10.5□□□□□ -0.73
NLRC3-202ENST00000359128 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
NLRC3-202ENST00000359128 IGHV3-16A0A0C4DH30 117 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE12BA1L429 117 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE7O76087 117 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE12FP0CL80 117 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE12GP0CL81 117 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 GAGE12IP0CL82 117 aa10.5□□□□□ -0.73
NLRC3-202ENST00000359128 GFI1Q99684 422 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 KLK9Q9UKQ9 250 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 THAP8Q8NA92 274 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 DMRT1Q9Y5R6 373 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 PRB1P04280 392 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 ANAPC10Q9UM13 185 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 C5orf63A6NC05 138 aa10.49□□□□□ -0.73
NLRC3-202ENST00000359128 NMSQ5H8A3 153 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 H3BUT2 72 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 RNASE2P10153 161 aaKnown RBP10.48□□□□□ -0.73
NLRC3-202ENST00000359128 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 MBD3L1Q8WWY6 194 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
NLRC3-202ENST00000359128 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
NLRC3-202ENST00000359128 SPOCK3Q9BQ16 436 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 SHANK2-AS3Q9BTD1 123 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 ITGB1BP1O14713 200 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 IGKV1-5P01602 117 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 OVOL2Q9BRP0 275 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 G3V318 75 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 ZNRD1Q9P1U0 126 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 KLF12Q9Y4X4 402 aa10.48□□□□□ -0.73
NLRC3-202ENST00000359128 LGALS1P09382 135 aaKnown RBP10.47□□□□□ -0.73
NLRC3-202ENST00000359128 LINC00205P59089 165 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 LY6G6EA0A0G2JKS1 128 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 RHODO00212 210 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 NDUFB8O95169 186 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 IGKV1-16P04430 117 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 C21orf62-AS1Q17RA5 79 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 FOXL2NBQ6ZUU3 175 aa10.47□□□□□ -0.73
NLRC3-202ENST00000359128 PIP4P1Q86T03 277 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms