RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PRR31Q5SQ13 230 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 DMRTC2Q8IXT2 367 aaPredicted RBP9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 ZNF114Q8NC26 417 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 RNASE6Q93091 150 aaKnown RBP9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 PSG8Q9UQ74 426 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 NCOR1O75376 2440 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 DENND4AQ7Z401 1863 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 PSG3Q16557 428 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 TMEM256Q8N2U0 113 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 GAS1P54826 345 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 UBE2E2Q96LR5 201 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 SBF2Q86WG5 1849 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 TMEM133Q9H2Q1 129 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 TRAV8-3A0A0A6YYJ7 113 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 C4orf51C9J302 202 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 NDPQ00604 133 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 SUPT4H1P63272 117 aaKnown RBP9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 VMO1Q7Z5L0 202 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 KLF2Q9Y5W3 355 aaPredicted RBP9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 NCR2O95944 276 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 PRCDQ00LT1 54 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 ZNF876PQ49A33 203 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 TMEM14EPQ6UXP3 125 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 MESP1Q9BRJ9 268 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 POLR3KQ9Y2Y1 108 aaPredicted RBP9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 EML6Q6ZMW3 1958 aa9.51□□□□□ -0.89
SPTBN1-202ENST00000356805 CHCHD2Q9Y6H1 151 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 K7EP13 123 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 UPK2O00526 184 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 LHBP01229 141 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 NAA38Q9BRA0 125 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 CRIM1Q9NZV1 1036 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 NMSQ5H8A3 153 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 A0A087X0K7 114 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 CGB7P0DN87 165 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 MST1P26927 711 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 MORN2Q502X0 79 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 ZNF497Q6ZNH5 498 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 IQCF6A8MYZ5 107 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 TIMM23O14925 209 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 EXOC3-AS1Q8N2X6 119 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 C9orf106Q8NAJ2 232 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 SHANK1Q9Y566 2161 aa9.5□□□□□ -0.89
SPTBN1-202ENST00000356805 OVOL1O14753 267 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 C15orf32Q32M92 178 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 C1orf159Q96HA4 380 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 SS18Q15532 418 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 KLHL30-AS1Q8NEE0 82 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 RPL36AP83881 106 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 Q6ZS49 121 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 LYPD1Q8N2G4 141 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 RPL36ALQ969Q0 106 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 ROS1P08922 2347 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 D6R8Y8 96 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 PAQR4Q8N4S7 273 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 TMEM126AQ9H061 195 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 FCN3O75636 299 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 IGLC2P0DOY2 106 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 IGLC3P0DOY3 106 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 TRAV41A0A0B4J266 112 aa9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 SRRM4A7MD48 611 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-202ENST00000356805 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 TNRC6AQ8NDV7 1962 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 K7EP34 96 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 PMS2P5A8MQ11 134 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 KLRD1Q13241 179 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 CACNA1BQ00975 2339 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 NDUFS5O43920 106 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 RASL10AQ92737 203 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 EPOPA6NHQ4 379 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 IFITM1P13164 125 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 C3orf56Q8N813 242 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 GFI1Q99684 422 aa9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 CNOT1A5YKK6 2376 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-202ENST00000356805 POU2AF1Q16633 256 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 MRPS18CQ9Y3D5 142 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 CFHR3Q02985 330 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 IGKV1D-43A0A0B4J1Z2 117 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 TCRAP04437 139 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 DEFB130BP0DP73 79 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 DEFB130AP0DP74 79 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 MBNL3Q9NUK0 354 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 IGHV1-24A0A0C4DH33 117 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 TANC2Q9HCD6 1990 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 ARHGAP32A7KAX9 2087 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms