RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KLF5Q13887 457 aaPredicted RBP14.26□□□□□ -0.13
COL27A1-201ENST00000356083 ZNF319Q9P2F9 582 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 ADAMTS7Q9UKP4 1686 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 DKK1O94907 266 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 TIMM17AQ99595 171 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 MRPS18AQ9NVS2 196 aaKnown RBP14.26□□□□□ -0.13
COL27A1-201ENST00000356083 DSCR8Q96T75 97 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 SPRR3Q9UBC9 169 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 UPK2O00526 184 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 VWA8A3KMH1 1905 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 ABCA2Q9BZC7 2435 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 FOXF2Q12947 444 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 NR2C2APQ86WQ0 139 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 B4DSR2 109 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 C1QTNF9P0C862 333 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 CHCHD2Q9Y6H1 151 aaPredicted RBP14.25□□□□□ -0.13
COL27A1-201ENST00000356083 DEFB131AP59861 70 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 SBF2Q86WG5 1849 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 TRBV5-5A0A0J9YX44 114 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 SMKR1H3BMG3 65 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 RASL11AQ6T310 242 aa14.25□□□□□ -0.13
COL27A1-201ENST00000356083 IGLV2-23P01705 113 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 LINC00518Q8N0U6 118 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 RNF166Q96A37 237 aaPredicted RBP14.24□□□□□ -0.13
COL27A1-201ENST00000356083 PMVKQ15126 192 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 C1QL4Q86Z23 238 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 IGF2BP2-AS1Q96M15 143 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 AGRNO00468 2067 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 IGHV4-4A0A075B6R2 117 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE12JA6NER3 117 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 IQCF6A8MYZ5 107 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE1Q13065 139 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE4Q13068 117 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE5Q13069 117 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 BAALCQ8WXS3 180 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 IGHV2-26A0A0B4J1V2 119 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 TEX48A0A1B0GUV7 120 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 IL17RELQ6ZVW7 336 aa14.24□□□□□ -0.13
COL27A1-201ENST00000356083 NDUFS8O00217 210 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 TRBV7-1A0A0A6YYK4 115 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 VCYO14598 125 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 Q5BKY6 102 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 UNQ6494/PRO21346Q6UXR6 183 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 SMIM2Q9BVW6 85 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 CHKB-CPT1BH3BT56 60 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 TMEM200BQ69YZ2 307 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 LINC01356Q8N9X3 169 aa14.23□□□□□ -0.13
COL27A1-201ENST00000356083 TNFSF13O75888 250 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 PRDM13Q9H4Q3 707 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 ANGP03950 147 aaKnown RBP14.22□□□□□ -0.13
COL27A1-201ENST00000356083 SPINK13Q1W4C9 94 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 C10orf55Q5SWW7 151 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 NDUFAF3Q9BU61 184 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 IGHV1-18A0A0C4DH31 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 RPL23P62829 140 aaKnown RBP14.22□□□□□ -0.13
COL27A1-201ENST00000356083 LAMTOR2Q9Y2Q5 125 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE12BA1L429 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE7O76087 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE12FP0CL80 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE12GP0CL81 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE12IP0CL82 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 GAGE6Q13070 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 YPEL1O60688 119 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 LCN12Q6JVE5 192 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 YPEL2Q96QA6 119 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 CITED1Q99966 193 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 TIMM21Q9BVV7 248 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 SCRT2Q9NQ03 307 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 IGKV1OR2-108A0A075B7D4 117 aa14.22□□□□□ -0.13
COL27A1-201ENST00000356083 TBX6O95947 436 aaPredicted RBP14.21□□□□□ -0.13
COL27A1-201ENST00000356083 IGKV1D-43A0A0B4J1Z2 117 aa14.21□□□□□ -0.13
COL27A1-201ENST00000356083 IGKV2D-24A0A075B6R9 120 aa14.21□□□□□ -0.13
COL27A1-201ENST00000356083 C9JAW5 83 aa14.21□□□□□ -0.13
COL27A1-201ENST00000356083 SP5Q6BEB4 398 aaPredicted RBP14.21□□□□□ -0.13
COL27A1-201ENST00000356083 BPESC1Q9GZL8 116 aa14.21□□□□□ -0.14
COL27A1-201ENST00000356083 TNRC6BQ9UPQ9 1833 aaKnown RBP14.21□□□□□ -0.14
COL27A1-201ENST00000356083 A0A087X0K7 114 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 IGHV3-38A0A0C4DH36 116 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 EFNB3Q15768 340 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 RUSC1-AS1Q66K80 236 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 TMEM105Q8N8V8 129 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 E9PLN8 166 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 SELLP14151 372 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 ZNF138P52744 262 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 MCRIP2Q9BUT9 160 aaKnown RBP14.2□□□□□ -0.14
COL27A1-201ENST00000356083 C4orf48Q5BLP8 95 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 IGKV1-5P01602 117 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 PPBPP02775 128 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 SLC25A16P16260 332 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 PLEKHB2Q96CS7 222 aa14.2□□□□□ -0.14
COL27A1-201ENST00000356083 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.19□□□□□ -0.14
COL27A1-201ENST00000356083 PPP1R3EQ9H7J1 279 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 C1orf100Q5SVJ3 147 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 RS1O15537 224 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 EGR2P11161 476 aaPredicted RBP14.19□□□□□ -0.14
COL27A1-201ENST00000356083 AZU1P20160 251 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 MYMXA0A1B0GTQ4 84 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 BMPERQ8N8U9 685 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 OCC1Q8TAD7 63 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms