RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 ZNF705GA8MUZ8 300 aaPredicted RBP12.04□□□□□ -0.48
TUFT1-201ENST00000353024 CA1P00915 261 aaPredicted RBP12.04□□□□□ -0.48
TUFT1-201ENST00000353024 UNQ5815/PRO19632Q6UWF5 114 aa12.04□□□□□ -0.48
TUFT1-201ENST00000353024 SIGLEC15Q6ZMC9 328 aa12.04□□□□□ -0.48
TUFT1-201ENST00000353024 GBGT1Q8N5D6 347 aa12.04□□□□□ -0.48
TUFT1-201ENST00000353024 RPH3ALQ9UNE2 315 aa12.04□□□□□ -0.48
TUFT1-201ENST00000353024 OR2T8A6NH00 312 aa12.03□□□□□ -0.48
TUFT1-201ENST00000353024 SH2D7A6NKC9 451 aaPredicted RBP12.03□□□□□ -0.48
TUFT1-201ENST00000353024 IGLV2-11P01706 119 aa12.03□□□□□ -0.48
TUFT1-201ENST00000353024 TCL1AP56279 114 aa12.03□□□□□ -0.48
TUFT1-201ENST00000353024 RASL11AQ6T310 242 aa12.03□□□□□ -0.48
TUFT1-201ENST00000353024 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
TUFT1-201ENST00000353024 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
TUFT1-201ENST00000353024 MEGF9Q9H1U4 602 aa12.03□□□□□ -0.48
TUFT1-201ENST00000353024 SERTAD4Q9NUC0 356 aa12.03□□□□□ -0.48
TUFT1-201ENST00000353024 AMY1AP04745 511 aa12.02□□□□□ -0.48
TUFT1-201ENST00000353024 IER3P46695 156 aa12.02□□□□□ -0.48
TUFT1-201ENST00000353024 ECSCRQ19T08 205 aa12.02□□□□□ -0.48
TUFT1-201ENST00000353024 LINC00322Q6ZN03 302 aaPredicted RBP12.02□□□□□ -0.48
TUFT1-201ENST00000353024 OR4F17Q8NGA8 305 aa12.02□□□□□ -0.48
TUFT1-201ENST00000353024 ZNF502Q8TBZ5 544 aa12.02□□□□□ -0.48
TUFT1-201ENST00000353024 TRAV40A0A0B4J280 105 aa12.02□□□□□ -0.49
TUFT1-201ENST00000353024 GATCO43716 136 aaKnown RBP12.02□□□□□ -0.49
TUFT1-201ENST00000353024 BRD3OSQ6XYD6 125 aa12.02□□□□□ -0.49
TUFT1-201ENST00000353024 LYPD1Q8N2G4 141 aa12.02□□□□□ -0.49
TUFT1-201ENST00000353024 GRAMD2BQ96HH9 432 aa12.02□□□□□ -0.49
TUFT1-201ENST00000353024 TRBV6-1A0A0K0K1D8 114 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 IZUMO1RA6ND01 250 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 LINC00587B1AMM8 73 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 G3V318 75 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 IGHV4-38-2P0DP08 117 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 ESDP10768 282 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 PAX1P15863 534 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 SRSF1Q07955 248 aaKnown RBP eCLIP12.01□□□□□ -0.49
TUFT1-201ENST00000353024 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 C19orf71A6NCJ1 209 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 SNURFLB1AK76 121 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 SPINK4O60575 86 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 C19orf54Q5BKX5 351 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 PRR27Q6MZM9 219 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 Q86TA4 180 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 TMEM219Q86XT9 240 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 NRGNQ92686 78 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 PRSS22Q9GZN4 317 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 PRDM13Q9H4Q3 707 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
TUFT1-201ENST00000353024 A0A1B0GUS0 222 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 HLA-DQA1P01909 254 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 CRISP2P16562 243 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 SLC35B1P78383 322 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 RHOGP84095 191 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 Q0VG73 95 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 ZNF843Q8N446 348 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 WIPF2Q8TF74 440 aaPredicted RBP12□□□□□ -0.49
TUFT1-201ENST00000353024 TP53TG3Q9ULZ0 132 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 MOB4Q9Y3A3 225 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 ZFHX3Q15911 3703 aa12□□□□□ -0.49
TUFT1-201ENST00000353024 ZFYVE26Q68DK2 2539 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 TRAV8-1A0A0A6YYK1 113 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 MSMBP08118 114 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 GOLT1AQ6ZVE7 132 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 Q71RC1 249 aaPredicted RBP11.99□□□□□ -0.49
TUFT1-201ENST00000353024 SOX21Q9Y651 276 aaPredicted RBP11.99□□□□□ -0.49
TUFT1-201ENST00000353024 SPG11Q96JI7 2443 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 ZNF785A8K8V0 405 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 NUPR1O60356 82 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 SCGB2A1O75556 95 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 GZMBP10144 247 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 CRIP2P52943 208 aaPredicted RBP11.99□□□□□ -0.49
TUFT1-201ENST00000353024 PAFAH1B2P68402 229 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 TMEM256Q8N2U0 113 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 CMTM2Q8TAZ6 248 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 TSKUQ8WUA8 353 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 CCDC140Q96MF4 163 aa11.99□□□□□ -0.49
TUFT1-201ENST00000353024 LINC00310P59036 64 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 PDE6HQ13956 83 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 CT83Q5H943 113 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 MRPL54Q6P161 138 aaKnown RBP11.98□□□□□ -0.49
TUFT1-201ENST00000353024 NUP35Q8NFH5 326 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 NAT8BQ9UHF3 227 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 MYO18BQ8IUG5 2567 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 GRIFINA4D1Z8 144 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 TMEM75Q8N9X5 138 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 ZFAND3Q9H8U3 227 aa11.98□□□□□ -0.49
TUFT1-201ENST00000353024 ZNF462Q96JM2 2506 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 NPIPB6E9PJ23 425 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 CLEC3BP05452 202 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 GPR183P32249 361 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 DSCR9P59020 149 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 PKIAP61925 76 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 OR10J3Q5JRS4 329 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 NEU1Q99519 415 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 RPP21Q9H633 154 aaKnown RBP11.97□□□□□ -0.49
TUFT1-201ENST00000353024 RABAC1Q9UI14 185 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
TUFT1-201ENST00000353024 UTP20O75691 2785 aaKnown RBP11.96□□□□□ -0.49
TUFT1-201ENST00000353024 DIRC3C9JPN6 131 aa11.96□□□□□ -0.49
TUFT1-201ENST00000353024 C16orf54Q6UWD8 224 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms