RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PRSS22Q9GZN4 317 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 RAB9BQ9NP90 201 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 SIGLEC8Q9NYZ4 499 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 U3KQA8 63 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 LTAP01374 205 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 HBDP02042 147 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 Q71RC1 249 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-201ENST00000352993 AMN1Q8IY45 258 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 ZNF479Q96JC4 524 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 GFRA4Q9GZZ7 299 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 MRPL36Q9P0J6 103 aaKnown RBP6.13□□□□□ -1.43
BRCA1-201ENST00000352993 PTPRBP23467 1997 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 MED13Q9UHV7 2174 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 C19orf71A6NCJ1 209 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 CT45A10P0DMU9 189 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 PPIFP30405 207 aaKnown RBP6.13□□□□□ -1.43
BRCA1-201ENST00000352993 CKS2P33552 79 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 LGALS9BQ3B8N2 356 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 LGALS9CQ6DKI2 356 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 LCNL1Q6ZST4 164 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 SLC25A48Q6ZT89 311 aaKnown RBP6.13□□□□□ -1.43
BRCA1-201ENST00000352993 SAP25Q8TEE9 199 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 CHAC1Q9BUX1 264 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 MLST8Q9BVC4 326 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 ZNF492Q9P255 531 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 E7EUB6 86 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 DUX4L9Q6RFH8 374 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-201ENST00000352993 GTSCR1Q86UQ5 136 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 ABHD17AQ96GS6 310 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 SPAG8Q99932 426 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-201ENST00000352993 CEP192Q8TEP8 1941 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 TMEM213A2RRL7 107 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 MZT1Q08AG7 82 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 Q86TA4 180 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 FAM169BQ8N8A8 192 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 MRPL20Q9BYC9 149 aaKnown RBP6.12□□□□□ -1.43
BRCA1-201ENST00000352993 KMT2BQ9UMN6 2715 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-201ENST00000352993 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 ATP5IP56385 69 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-201ENST00000352993 GAGE13Q4V321 117 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 SFTA2Q6UW10 78 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 C6orf15Q6UXA7 325 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-201ENST00000352993 ORMDL3Q8N138 153 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 CCL13Q99616 98 aa6.12□□□□□ -1.43
BRCA1-201ENST00000352993 FREM2Q5SZK8 3169 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 SIVA1O15304 175 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 CXCL12P48061 93 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 WT1-ASQ06250 92 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 C17orf58Q2M2W7 97 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 GCSAMQ8N6F7 178 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-201ENST00000352993 KLF12Q9Y4X4 402 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 TECTAO75443 2155 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 TRGV5A0A0B4J1U4 118 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 SRRM5B3KS81 715 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 RBP4P02753 201 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 CECR9P0C854 216 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 MC5RP33032 325 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 SPANXB1Q9NS25 103 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-201ENST00000352993 TMEM160Q9NX00 188 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 KLRC4-KLRK1H3BQV0 150 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 TNFRSF1AP19438 455 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 INSL3P51460 131 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 TWIST1Q15672 202 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 OR10X1Q8NGY0 326 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 DPF1Q92782 380 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 MRAP2Q96G30 205 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 HIST1H4GQ99525 98 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 NDUFA4L2Q9NRX3 87 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 HIGD1AQ9Y241 93 aa6.11□□□□□ -1.43
BRCA1-201ENST00000352993 IGHV3-72A0A0B4J1Y9 119 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 F8W1H4 67 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 SPRNQ5BIV9 151 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 LYZL1Q6UWQ5 148 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 FAM222BQ8WU58 562 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 ZNF48Q96MX3 618 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-201ENST00000352993 FOXC2Q99958 501 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 SMPXQ9UHP9 88 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 AGRNO00468 2067 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 IGKV2D-26A0A0A0MRZ7 120 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 NDUFS7O75251 213 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 APOMO95445 188 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 MYCNOSP40205 109 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 KIR2DL2P43627 348 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-201ENST00000352993 PIP4P2Q8N4L2 257 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 FAM216BQ8N7L0 139 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 IGKV1D-37A0A075B6S9 117 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 TMEM189A5PLL7 270 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 POU2AF1Q16633 256 aa6.1□□□□□ -1.43
BRCA1-201ENST00000352993 A0A096LNJ9 63 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 PATE3B3GLJ2 98 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 LEPP41159 167 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 ZC2HC1BQ5TFG8 222 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 SYT8Q8NBV8 401 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 OSR1Q8TAX0 266 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-201ENST00000352993 C20orf78Q9BR46 151 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 OTORQ9NRC9 128 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms