RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SLC25A15Q9Y619 301 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 U3KQK5 164 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 SPEGQ15772 3267 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 IGLV3-9A0A075B6K5 115 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 SHISA9B4DS77 424 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 NKX2-8O15522 239 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 ARMS2P0C7Q2 107 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 FAM106CPP0CH98 169 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 MC5RP33032 325 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 IFI27P40305 119 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 NMUP48645 174 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 FAM106AQ4KMX7 169 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 ZNF493Q6ZR52 646 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 BCL6BQ8N143 479 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 RBMXL3Q8N7X1 1067 aaKnown RBP8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 C9orf106Q8NAJ2 232 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 C18orf15Q96N68 181 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 RNF7Q9UBF6 113 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 SPAARA0A1B0GVQ0 90 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 VSTM5A8MXK1 200 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 C22orf46C9J442 243 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 K7EQM0 130 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 HBDP02042 147 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 HOXB4P17483 251 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 GCSHP23434 173 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 SUB1P53999 127 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 PAX8Q06710 450 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 LOXL1Q08397 574 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 WFDC2Q14508 124 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 UTF1Q5T230 341 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 Q6AWC8 147 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 IGFL2Q6UWQ7 119 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 ZNF833PQ6ZTB9 187 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 MOGAT3Q86VF5 341 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 ZNF502Q8TBZ5 544 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 NPIPB3Q92617 1050 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 Q9H3A6 140 aa8.24□□□□□ -1.09
CHRNA1-202ENST00000348749 DYSFO75923 2080 aa8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 IGHV3OR15-7A0A075B7D8 119 aa8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 SAA1P0DJI8 122 aaPredicted RBP8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 CD59P13987 128 aa8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 GP9P14770 177 aa8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 SRSF1Q07955 248 aaKnown RBP eCLIP8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 ZCCHC24Q8N2G6 241 aaKnown RBP8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 LEAP2Q969E1 77 aa8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 TM2D2Q9BX73 214 aa8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 MRPL16Q9NX20 251 aaKnown RBP8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 F11RQ9Y624 299 aaKnown RBP8.23□□□□□ -1.09
CHRNA1-202ENST00000348749 TRAV17A0A0B4J275 112 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 hADV38S2A0JD32 116 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 PLAUP00749 431 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 HLA-DRB4P13762 266 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 CIARTQ8N365 385 aaPredicted RBP8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 GEMIN7Q9H840 131 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 LINC00312Q9Y6C7 94 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 HLA-DRB4X5D2U9 266 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 IGLV2-11P01706 119 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 IGKV1-16P04430 117 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 CEND1Q8N111 149 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 C8orf31Q8N9H6 132 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 TMEM167AQ8TBQ9 72 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 RITA1Q96K30 269 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 GAFA1Q96PS6 74 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 OTORQ9NRC9 128 aa8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 HEATR1Q9H583 2144 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-202ENST00000348749 MBD3L4A6NDZ8 208 aaPredicted RBP8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 MBD3L3A6NE82 208 aaPredicted RBP8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 MBD3L5A6NJ08 208 aaPredicted RBP8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 IGLL5B9A064 214 aa8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 NDUFS7O75251 213 aa8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 C5orf64Q2M2E5 130 aa8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 TEX36Q5VZQ5 186 aa8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 TTC9CQ8N5M4 171 aa8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 MBD3L2Q8NHZ7 208 aaPredicted RBP8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 SRSF12Q8WXF0 261 aaKnown RBP8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 ARRDC1-AS1Q9H2J1 176 aa8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 ZMAT4Q9H898 229 aa8.21□□□□□ -1.09
CHRNA1-202ENST00000348749 DSCAMO60469 2012 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 MYO15AQ9UKN7 3530 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 FBLL1A6NHQ2 334 aaKnown RBP8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 ZNF785A8K8V0 405 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 D6R8Y8 96 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 K7ERJ3 54 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 SLC25A17O43808 307 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 THBDP07204 575 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 TCTAP57738 103 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 SRSF6Q13247 344 aaKnown RBP8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 TAL2Q16559 108 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 MSMPQ1L6U9 139 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 ETDBQ3ZM63 59 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 ZNF418Q8TF45 676 aaPredicted RBP8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 PRELID3AQ96N28 172 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 TRGV9Q99603 122 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 PRO0461Q9UI25 63 aa8.21□□□□□ -1.1
CHRNA1-202ENST00000348749 WI2-2373I1.2A0A1W2PRP0 233 aa8.2□□□□□ -1.1
CHRNA1-202ENST00000348749 TSPAN13O95857 204 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms