RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 NUDT10Q8NFP7 164 aa15.93■□□□□ 0.14
CHRNA3-202ENST00000348639 MBD6Q96DN6 1003 aa15.93■□□□□ 0.14
CHRNA3-202ENST00000348639 NUDT11Q96G61 164 aa15.93■□□□□ 0.14
CHRNA3-202ENST00000348639 PACRGQ96M98 296 aaPredicted RBP15.93■□□□□ 0.14
CHRNA3-202ENST00000348639 OR2T8A6NH00 312 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 GATCO43716 136 aaKnown RBP15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 IGHV3-23P01764 117 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 C5orf56Q8N8D9 126 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 SGK494Q96LW2 274 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 CHRDL1Q9BU40 450 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 MRPL18Q9H0U6 180 aaKnown RBP15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 CTSGP08311 255 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 TCL1AP56279 114 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 ECSCRQ19T08 205 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 COX19Q49B96 90 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 LYPD1Q8N2G4 141 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 EXOC3-AS1Q8N2X6 119 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 CMTM2Q8TAZ6 248 aa15.92■□□□□ 0.14
CHRNA3-202ENST00000348639 FAM208BQ5VWN6 2430 aa15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 SH2D7A6NKC9 451 aaPredicted RBP15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 AMBPP02760 352 aa15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 FRMD6-AS1P0C7T7 363 aa15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 COX6B1P14854 86 aa15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 SRSF1Q07955 248 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 BCL6BQ8N143 479 aaPredicted RBP15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 GRAMD2BQ96HH9 432 aa15.91■□□□□ 0.14
CHRNA3-202ENST00000348639 SNURFLB1AK76 121 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 CA1P00915 261 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 PRR27Q6MZM9 219 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 WDR73Q6P4I2 378 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 C17orf77Q96MU5 243 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 CHD6Q8TD26 2715 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 IZUMO1RA6ND01 250 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 MT-ND6P03923 174 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 SIGLEC15Q6ZMC9 328 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 TMEM219Q86XT9 240 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 ZNF414Q96IQ9 312 aa15.9■□□□□ 0.14
CHRNA3-202ENST00000348639 C15orf32Q32M92 178 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 ZNF502Q8TBZ5 544 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 MEGF9Q9H1U4 602 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 MOB4Q9Y3A3 225 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 UBR5O95071 2799 aaPredicted RBP15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 SPINK4O60575 86 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 MSMBP08118 114 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 SLC35B1P78383 322 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 RHOGP84095 191 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 PIFOQ8TCI5 191 aa15.89■□□□□ 0.13
CHRNA3-202ENST00000348639 TRBV6-1A0A0K0K1D8 114 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 LINC01548A6NM66 108 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 IGHV4-38-2P0DP08 117 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 PDE6HQ13956 83 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 TMEM136Q6ZRR5 245 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 GOLT1AQ6ZVE7 132 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 ZNF492Q9P255 531 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 LRRK2Q5S007 2527 aa15.88■□□□□ 0.13
CHRNA3-202ENST00000348639 G3V318 75 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 IGLV2-11P01706 119 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 AMY1AP04745 511 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 Q86TA4 180 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 TSKUQ8WUA8 353 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 GSN-AS1Q9NRJ2 163 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 DSCR9P59020 149 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 GBGT1Q8N5D6 347 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 PRSS22Q9GZN4 317 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 NAT8BQ9UHF3 227 aa15.87■□□□□ 0.13
CHRNA3-202ENST00000348639 TRAV8-1A0A0A6YYK1 113 aa15.86■□□□□ 0.13
CHRNA3-202ENST00000348639 C19orf71A6NCJ1 209 aa15.86■□□□□ 0.13
CHRNA3-202ENST00000348639 DNLZQ5SXM8 178 aa15.86■□□□□ 0.13
CHRNA3-202ENST00000348639 MRPL54Q6P161 138 aaKnown RBP15.86■□□□□ 0.13
CHRNA3-202ENST00000348639 TMEM18Q96B42 140 aa15.86■□□□□ 0.13
CHRNA3-202ENST00000348639 RABAC1Q9UI14 185 aa15.86■□□□□ 0.13
CHRNA3-202ENST00000348639 PAX1P15863 534 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 CRISP2P16562 243 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 RASL11AQ6T310 242 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 LINC00322Q6ZN03 302 aaPredicted RBP15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 TMEM75Q8N9X5 138 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 HLA-DQA1P01909 254 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 RPL7P18124 248 aaKnown RBP15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 GPR183P32249 361 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 NUP35Q8NFH5 326 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 RPP21Q9H633 154 aaKnown RBP15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 HIF1ANQ9NWT6 349 aa15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 SOX21Q9Y651 276 aaPredicted RBP15.85■□□□□ 0.13
CHRNA3-202ENST00000348639 FBN2P35556 2912 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 GRIFINA4D1Z8 144 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 BMPR1BO00238 502 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 S100A7P31151 101 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 CT83Q5H943 113 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 TMEM256Q8N2U0 113 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 WIPF2Q8TF74 440 aaPredicted RBP15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 ZNF331Q9NQX6 463 aaPredicted RBP15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 A0A1B0GUS0 222 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 B4DSR2 109 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 K7EQM0 130 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 CLEC3BP05452 202 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 PRNTQ86SH4 94 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 NEU1Q99519 415 aa15.84■□□□□ 0.13
CHRNA3-202ENST00000348639 CENPEQ02224 2701 aa15.83■□□□□ 0.13
CHRNA3-202ENST00000348639 P01737 135 aa15.83■□□□□ 0.12
CHRNA3-202ENST00000348639 CRIP2P52943 208 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms