RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 IGKV1D-17A0A075B6S4 117 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 TRBV7-9A0A0J9YWB2 115 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 A0A1B0GUS0 222 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 APOMO95445 188 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 FOXL1Q12952 345 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 UBE2DNLQ8IWF7 75 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 ZCCHC24Q8N2G6 241 aaKnown RBP6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 OR10W1Q8NGF6 305 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 RCHY1Q96PM5 261 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 MESP1Q9BRJ9 268 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 DPH3P1Q9H4G8 78 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 WFDC1Q9HC57 220 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 KAAG1Q9UBP8 84 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 GRIFINA4D1Z8 144 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 SAA4P35542 130 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 ZNF124Q15973 351 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 PYY3Q5JQD4 70 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 Q5PR19 223 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 C8orf31Q8N9H6 132 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 COQ2Q96H96 371 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 OVOL2Q9BRP0 275 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 S4R3C0 116 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV2-70DA0A0C4DH43 119 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 FAM231BA6NCW3 169 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 VCYO14598 125 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 MLNRO43193 412 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 IGLV1-44P01699 117 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 TCRAP04437 139 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 HGFACQ04756 655 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 NSUN5P1Q3KNT7 163 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 TEX36Q5VZQ5 186 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 PKIGQ9Y2B9 76 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 SNRNP200O75643 2136 aaKnown RBP6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 IGLV3-9A0A075B6K5 115 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 IGKV1-27A0A075B6S5 117 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 TRAV8-6A0A0B4J262 113 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 H7C2G1 150 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 ELANEP08246 267 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 MDKP21741 143 aaPredicted RBP6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 SRSF2Q01130 221 aaKnown RBP6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 IL17RELQ6ZVW7 336 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 KLHL30-AS1Q8NEE0 82 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 EGR1P18146 543 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 RASL10AQ92737 203 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 AGMATQ9BSE5 352 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 MS4A6AQ9H2W1 248 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 TOMM7Q9P0U1 55 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 COL4A3Q01955 1670 aa6.29□□□□□ -1.4
ATP2B4-201ENST00000341360 CD28P10747 220 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 GATA2P23769 480 aaPredicted RBP6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 GCSAMLQ5JQS6 135 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 MRPL16Q9NX20 251 aaKnown RBP6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 KIAA1671Q9BY89 1806 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 SLC17A3O00476 420 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 LINC00614P0C842 121 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 FREM3P0C091 2139 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 C9JQL5 133 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 PSG3Q16557 428 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 CITED1Q99966 193 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 GFRA4Q9GZZ7 299 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 NUP210Q8TEM1 1887 aaPredicted RBP6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 MUC21Q5SSG8 566 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 C5orf30Q96GV9 206 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 RHPN1-AS1Q9BWJ2 59 aa6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
ATP2B4-201ENST00000341360 LY6G6EA0A0G2JKS1 128 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 IGKV1-5P01602 117 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 PYYP10082 97 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 RNASE2P10153 161 aaKnown RBP6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 C14orf144Q96I85 54 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 SHANK2-AS3Q9BTD1 123 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 CLDN16Q9Y5I7 305 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 U3KQA8 63 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 EMP1P54849 157 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 APOC4P55056 127 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 SLAQ13239 276 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 IGFL2Q6UWQ7 119 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 COL4A6Q14031 1691 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 SRRM4A7MD48 611 aaKnown RBP6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 PMS2P5A8MQ11 134 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 LINC01619G3V211 115 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 NDUFS6O75380 124 aaKnown RBP6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 CXCL1P09341 107 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 LAGE3Q14657 143 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 CT83Q5H943 113 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 LYPD6Q86Y78 171 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 RMI2Q96E14 147 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 NCOR2Q9Y618 2525 aa6.27□□□□□ -1.41
ATP2B4-201ENST00000341360 IGKV1D-8A0A087WSZ0 117 aa6.26□□□□□ -1.41
ATP2B4-201ENST00000341360 NDUFA4O00483 81 aa6.26□□□□□ -1.41
ATP2B4-201ENST00000341360 FBLN7Q53RD9 439 aa6.26□□□□□ -1.41
ATP2B4-201ENST00000341360 LCNL1Q6ZST4 164 aa6.26□□□□□ -1.41
ATP2B4-201ENST00000341360 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
ATP2B4-201ENST00000341360 C1orf147Q96MC9 270 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms