RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 KRTAP2-2Q9BYT5 123 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 KLF12Q9Y4X4 402 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 PRSS1P07477 247 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 POLR2IP36954 125 aaKnown RBP6.69□□□□□ -1.34
ATXN3-201ENST00000340660 HSP90B2PQ58FF3 399 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 C1orf100Q5SVJ3 147 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 GFI1BQ5VTD9 330 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 FAM122CQ6P4D5 195 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 OR51G1Q8NGK1 321 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 URM1Q9BTM9 101 aaKnown RBP6.69□□□□□ -1.34
ATXN3-201ENST00000340660 TMBIM4Q9HC24 238 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 PPP1R14DQ9NXH3 145 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 FKBP11Q9NYL4 201 aa6.69□□□□□ -1.34
ATXN3-201ENST00000340660 TRGV4A0A0C4DH28 118 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 KRASP01116 189 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 G6PCP35575 357 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 OPRK1P41145 380 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 SUPT4H1P63272 117 aaKnown RBP6.68□□□□□ -1.34
ATXN3-201ENST00000340660 ERHP84090 104 aaKnown RBP6.68□□□□□ -1.34
ATXN3-201ENST00000340660 MEF2DQ14814 521 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 DGAT2L7PQ6IED9 249 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 Q6ZS49 121 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 OR51H1Q8NH63 302 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 RMI2Q96E14 147 aa6.68□□□□□ -1.34
ATXN3-201ENST00000340660 MYCBPQ99417 103 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-201ENST00000340660 PARD6GQ9BYG4 376 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-201ENST00000340660 MRPL16Q9NX20 251 aaKnown RBP6.68□□□□□ -1.34
ATXN3-201ENST00000340660 MUC21A0A0G2JKD1 596 aa6.67□□□□□ -1.34
ATXN3-201ENST00000340660 TOMM40O96008 361 aa6.67□□□□□ -1.34
ATXN3-201ENST00000340660 SFTA3P0C7M3 94 aa6.67□□□□□ -1.34
ATXN3-201ENST00000340660 OR10J1P30954 320 aa6.67□□□□□ -1.34
ATXN3-201ENST00000340660 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
ATXN3-201ENST00000340660 RNASE2P10153 161 aaKnown RBP6.66□□□□□ -1.34
ATXN3-201ENST00000340660 NUP62P37198 522 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-201ENST00000340660 MEOX2P50222 304 aa6.66□□□□□ -1.34
ATXN3-201ENST00000340660 CATR1Q13166 79 aa6.66□□□□□ -1.34
ATXN3-201ENST00000340660 C1orf194Q5T5A4 169 aa6.66□□□□□ -1.34
ATXN3-201ENST00000340660 C10orf25Q5T742 122 aa6.66□□□□□ -1.34
ATXN3-201ENST00000340660 OR8A1Q8NGG7 326 aa6.66□□□□□ -1.34
ATXN3-201ENST00000340660 Q8TAT8 98 aa6.66□□□□□ -1.34
ATXN3-201ENST00000340660 MED4Q9NPJ6 270 aa6.66□□□□□ -1.34
ATXN3-201ENST00000340660 GGTLC3B5MD39 225 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 CORTO00230 105 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 LIMS3P0CW19 117 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 LIMS4P0CW20 117 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 RD3LP0DJH9 198 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 HSPA13P48723 471 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 RND2P52198 227 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 RPL19P84098 196 aaKnown RBP6.65□□□□□ -1.34
ATXN3-201ENST00000340660 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 IQCF2Q8IXL9 164 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 NHLRC2Q8NBF2 726 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 ZNF738Q8NE65 137 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 SLC24A4Q8NFF2 622 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 SECTM1Q8WVN6 248 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 ZNF479Q96JC4 524 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 CENPOQ9BU64 300 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 PBDC1Q9BVG4 233 aa6.65□□□□□ -1.34
ATXN3-201ENST00000340660 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
ATXN3-201ENST00000340660 PSG1P11464 419 aa6.64□□□□□ -1.35
ATXN3-201ENST00000340660 SNCAP37840 140 aa6.64□□□□□ -1.35
ATXN3-201ENST00000340660 RPL5P46777 297 aaKnown RBP6.64□□□□□ -1.35
ATXN3-201ENST00000340660 MS4A2Q01362 244 aa6.64□□□□□ -1.35
ATXN3-201ENST00000340660 MSMO1Q15800 293 aa6.64□□□□□ -1.35
ATXN3-201ENST00000340660 PRSS54Q6PEW0 395 aa6.64□□□□□ -1.35
ATXN3-201ENST00000340660 SH2D6Q7Z4S9 175 aa6.64□□□□□ -1.35
ATXN3-201ENST00000340660 ARGLU1Q9NWB6 273 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-201ENST00000340660 ATG12O94817 140 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 GATA1P15976 413 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-201ENST00000340660 PSMA1P25786 263 aaKnown RBP6.63□□□□□ -1.35
ATXN3-201ENST00000340660 TCL1AP56279 114 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 SUMO2P61956 95 aaKnown RBP6.63□□□□□ -1.35
ATXN3-201ENST00000340660 P2RY14Q15391 338 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 TWIST1Q15672 202 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 AADACL3Q5VUY0 350 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 OR8G2PQ6IF36 304 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 C10orf67Q8IYJ2 551 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 OR8I2Q8N0Y5 310 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 ZNF680Q8NEM1 530 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 LYPD6BQ8NI32 183 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 FCAMRQ8WWV6 532 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 PYGO2Q9BRQ0 406 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 RSG1Q9BU20 258 aa6.63□□□□□ -1.35
ATXN3-201ENST00000340660 TRAV12-3A0A0B4J271 114 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 CTXN2P0C2S0 81 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 LPAR6P43657 344 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 HSPE1P61604 102 aaKnown RBP6.62□□□□□ -1.35
ATXN3-201ENST00000340660 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 ZBTB34Q8NCN2 500 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 OR56B1Q8NGI3 324 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 CANT1Q8WVQ1 401 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 RAB3CQ96E17 227 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 RRNAD1Q96FB5 475 aaKnown RBP6.62□□□□□ -1.35
ATXN3-201ENST00000340660 SLC25A32Q9H2D1 315 aa6.62□□□□□ -1.35
ATXN3-201ENST00000340660 PNMA8CA0A1B0GUJ8 204 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 J3KRW8 73 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 TSPAN13O95857 204 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 PSMB9P28065 219 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms