RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 HLA-DMBP28068 263 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 THAP8Q8NA92 274 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 TMEM68Q96MH6 324 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 SRD5A3Q9H8P0 318 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 A0A1W2PRE2 83 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 PRSS47A8MTI9 375 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 HLA-DRB1P01911 266 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 RPL19P84098 196 aaKnown RBP8□□□□□ -1.13
RBFOX1-202ENST00000340209 BPIFA4PQ86YQ2 179 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 OR2D3Q8NGH3 330 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 YPEL4Q96NS1 127 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 PRO1933Q9H354 126 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 ITPR2Q14571 2701 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 FNDC10F2Z333 226 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 IL17RELQ6ZVW7 336 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 FANCD2OSQ96PS1 177 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF586Q9NXT0 402 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 EPDR1Q9UM22 224 aa8□□□□□ -1.13
RBFOX1-202ENST00000340209 TRGV3P03979 118 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 FABP1P07148 127 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 ADMP35318 185 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 TPPP2P59282 170 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 MINOS1Q5TGZ0 78 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 Q8TAT8 98 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 C19orf24Q9BVV8 132 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 MRPL18Q9H0U6 180 aaKnown RBP7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 MINOS1-NBL1R4GNA1 71 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 FLNBO75369 2602 aaKnown RBP7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 TRBV24-1A0A075B6N3 115 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 NTF3P20783 257 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 BLCAPP62952 87 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 PACRGQ96M98 296 aaPredicted RBP7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 IGKV2-40A0A087WW87 121 aaPredicted RBP7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 IGKV2D-40P01614 121 aaPredicted RBP7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 SRP14P37108 136 aaKnown RBP7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 KHDC1LQ5JSQ8 128 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 TMEM256Q8N2U0 113 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF843Q8N446 348 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 C10orf105Q8TEF2 133 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 PGLYRP4Q96LB8 373 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 SAMD10Q9BYL1 202 aa7.99□□□□□ -1.13
RBFOX1-202ENST00000340209 PSMB11A5LHX3 300 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF705FA8MVS1 300 aaPredicted RBP7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 GGCTO75223 188 aaKnown RBP7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 MSMBP08118 114 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 PMCHP20382 165 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 TXNDC17Q9BRA2 123 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF331Q9NQX6 463 aaPredicted RBP7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 NF1P21359 2839 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 IGHV1-69DA0A0B4J2H0 117 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 TMEM8BA6NDV4 472 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 UBE2CO00762 179 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 IGHV1-69P01742 117 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 OR5R1Q8NH85 324 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 IL36BQ9NZH7 164 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 AVPP01185 164 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 SRD5A1P18405 259 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF491Q8N8L2 437 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 STXBP6Q8NFX7 210 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 F2Z2F3 143 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 Q6ZS46 218 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 RNF182Q8N6D2 247 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 AAMDCQ9H7C9 122 aa7.98□□□□□ -1.13
RBFOX1-202ENST00000340209 NDUFA3O95167 84 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 P01737 135 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 CRYGCP07315 174 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 NUDT10Q8NFP7 164 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 NUDT11Q96G61 164 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 RNF5Q99942 180 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 TMEM242Q9NWH2 141 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 CLEC5AQ9NY25 188 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 GP9P14770 177 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 HOXA5P20719 270 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 CDX1P47902 265 aaPredicted RBP7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 NPBQ8NG41 125 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 BTF3L4Q96K17 158 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 IFITM10A6NMD0 228 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 OVOL3O00110 214 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 PHOX2AO14813 284 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 MAJINQ3KP22 176 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 WFDC3Q8IUB2 231 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 C5orf17Q8NAS9 161 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 V9GYV3 84 aa7.97□□□□□ -1.13
RBFOX1-202ENST00000340209 MXRA5Q9NR99 2828 aa7.96□□□□□ -1.13
RBFOX1-202ENST00000340209 IGLV11-55A0A075B6I3 123 aa7.96□□□□□ -1.13
RBFOX1-202ENST00000340209 TCRAP04437 139 aa7.96□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF705DP0CH99 300 aaPredicted RBP7.96□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF705BP0CI00 300 aaPredicted RBP7.96□□□□□ -1.13
RBFOX1-202ENST00000340209 CRISP2P16562 243 aa7.96□□□□□ -1.13
RBFOX1-202ENST00000340209 TFPI2P48307 235 aa7.96□□□□□ -1.13
RBFOX1-202ENST00000340209 APCP25054 2843 aa7.96□□□□□ -1.14
RBFOX1-202ENST00000340209 HIGD1CA8MV81 97 aa7.96□□□□□ -1.14
RBFOX1-202ENST00000340209 H0Y8G0 127 aa7.96□□□□□ -1.14
RBFOX1-202ENST00000340209 SCGB2A1O75556 95 aa7.96□□□□□ -1.14
RBFOX1-202ENST00000340209 HIST1H1EP10412 219 aaKnown RBP7.96□□□□□ -1.14
RBFOX1-202ENST00000340209 HIST3H2BBQ8N257 126 aa7.96□□□□□ -1.14
RBFOX1-202ENST00000340209 TBL2Q9Y4P3 447 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms