RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 FGF16O43320 207 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 TMEM50AO95807 157 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
C9orf47-201ENST00000334490 OSTCQ9NRP0 149 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 CYTL1Q9NRR1 136 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
C9orf47-201ENST00000334490 WISP2O76076 250 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 PLA2G5P39877 138 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 C15orf65H3BRN8 121 aa12.1□□□□□ -0.47
C9orf47-201ENST00000334490 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
C9orf47-201ENST00000334490 IGFL4Q6B9Z1 124 aa12.1□□□□□ -0.47
C9orf47-201ENST00000334490 NDUFB8O95169 186 aa12.1□□□□□ -0.47
C9orf47-201ENST00000334490 TOMM40O96008 361 aa12.1□□□□□ -0.47
C9orf47-201ENST00000334490 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
C9orf47-201ENST00000334490 TLN1Q9Y490 2541 aaKnown RBP12.1□□□□□ -0.47
C9orf47-201ENST00000334490 SEM1Q6ZVN7 128 aa12.1□□□□□ -0.47
C9orf47-201ENST00000334490 SCGB3A1Q96QR1 104 aa12.1□□□□□ -0.47
C9orf47-201ENST00000334490 KLF2Q9Y5W3 355 aaPredicted RBP12.1□□□□□ -0.47
C9orf47-201ENST00000334490 ZNF134P52741 427 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
C9orf47-201ENST00000334490 CTSZQ9UBR2 303 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 DEFB113Q30KQ7 82 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 PLXNB3Q9ULL4 1909 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 H3BVH4 76 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 TDGF1P3P51864 188 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 TCRAP04437 139 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 ZNF138P52744 262 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 RAB37Q96AX2 223 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 ZNF414Q96IQ9 312 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
C9orf47-201ENST00000334490 TMEM160Q9NX00 188 aa12.09□□□□□ -0.47
C9orf47-201ENST00000334490 CA1P00915 261 aaPredicted RBP12.08□□□□□ -0.47
C9orf47-201ENST00000334490 DIAPH2-AS1Q14236 149 aa12.08□□□□□ -0.47
C9orf47-201ENST00000334490 C1orf122Q6ZSJ8 110 aa12.08□□□□□ -0.47
C9orf47-201ENST00000334490 Q8NA96 180 aa12.08□□□□□ -0.47
C9orf47-201ENST00000334490 A0A087WWC5 75 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.08□□□□□ -0.48
C9orf47-201ENST00000334490 VPS25Q9BRG1 176 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 NDUFA4L2Q9NRX3 87 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 PCDH15Q96QU1 1955 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 TRAV9-1A0A075B6T8 112 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 H7C2G1 150 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 LIME1Q9H400 295 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 COL4A3Q01955 1670 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 FXYD7P58549 80 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 SPATA45Q537H7 98 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 LCN12Q6JVE5 192 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 C11orf53Q8IXP5 236 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 ATOH7Q8N100 152 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 Q8TAT8 98 aa12.08□□□□□ -0.48
C9orf47-201ENST00000334490 NRGNQ92686 78 aa12.07□□□□□ -0.48
C9orf47-201ENST00000334490 UBE2E2Q96LR5 201 aa12.07□□□□□ -0.48
C9orf47-201ENST00000334490 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
C9orf47-201ENST00000334490 TRAV12-3A0A0B4J271 114 aa12.07□□□□□ -0.48
C9orf47-201ENST00000334490 ATP5LO75964 103 aa12.07□□□□□ -0.48
C9orf47-201ENST00000334490 ZNF25P17030 456 aaPredicted RBP12.07□□□□□ -0.48
C9orf47-201ENST00000334490 TRAV1-1A0A0B4J248 108 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 A6NJY4 79 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 CDX1P47902 265 aaPredicted RBP12.06□□□□□ -0.48
C9orf47-201ENST00000334490 PKIAP61925 76 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 IGHV4-30-2A0A087WSY4 118 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 SPRNQ5BIV9 151 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 OR11H1Q8NG94 326 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 OR11H2Q8NH07 326 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 C2orf88Q9BSF0 95 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 HIVEP3Q5T1R4 2406 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 PRR14LQ5THK1 2151 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 HOXA3O43365 443 aaPredicted RBP12.06□□□□□ -0.48
C9orf47-201ENST00000334490 DEFB131AP59861 70 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 CACNG7P62955 275 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 LINC00477Q96M19 166 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 TOMM7Q9P0U1 55 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 ATRAIDQ6UW56 229 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 TCF23Q7RTU1 214 aa12.06□□□□□ -0.48
C9orf47-201ENST00000334490 ABCA2Q9BZC7 2435 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 TRAV8-1A0A0A6YYK1 113 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 F2Z2F3 143 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 FNDC10F2Z333 226 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 NUDT10Q8NFP7 164 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 NUDT11Q96G61 164 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 HIST1H4GQ99525 98 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 GZMBP10144 247 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 TSKUQ8WUA8 353 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 C1QTNF4Q9BXJ3 329 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 NRN1Q9NPD7 142 aa12.05□□□□□ -0.48
C9orf47-201ENST00000334490 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 LINC01619G3V211 115 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 DEFB112Q30KQ8 113 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 SLC25A34Q6PIV7 304 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 WDR87Q6ZQQ6 2873 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms