RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 TRAV3A0A0B4J244 114 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 SRP19P09132 144 aaKnown RBP9.08□□□□□ -0.96
SHC4-201ENST00000332408 CDX1P47902 265 aaPredicted RBP9.08□□□□□ -0.96
SHC4-201ENST00000332408 RPL29P47914 159 aaKnown RBP9.08□□□□□ -0.96
SHC4-201ENST00000332408 MEOX2P50222 304 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 C4orf3Q8WVX3 66 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 HIST1H2BAQ96A08 127 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 ZNF48Q96MX3 618 aaPredicted RBP9.08□□□□□ -0.96
SHC4-201ENST00000332408 ANAPC10Q9UM13 185 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 F11RQ9Y624 299 aaKnown RBP9.08□□□□□ -0.96
SHC4-201ENST00000332408 NPIPB5A8MRT5 1133 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 CENPWQ5EE01 88 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 OR4B1Q8NGF8 309 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 SOX21Q9Y651 276 aaPredicted RBP9.08□□□□□ -0.96
SHC4-201ENST00000332408 CXorf65A6NEN9 183 aa9.08□□□□□ -0.96
SHC4-201ENST00000332408 VCANP13611 3396 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 MT-ND6P03923 174 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 CGB3P0DN86 165 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 CGB7P0DN87 165 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 STHQ8IWL8 128 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 REV3LO60673 3130 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 A0A0G2JRQ6 117 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 PAX2Q02962 417 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 TMEM116Q8NCL8 245 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 WFDC12Q8WWY7 111 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 IGHV7-81A0A0B4J1V7 117 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 IGHV3-66A0A0C4DH42 116 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 TRGC2P03986 189 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 ATP5G3P48201 142 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 Q6ZRM9 215 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 REC114Q7Z4M0 266 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 VAMP8Q9BV40 100 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 DAZ1Q9NQZ3 744 aaKnown RBP9.07□□□□□ -0.96
SHC4-201ENST00000332408 M0R2Z0 102 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 OR5AL1P0C617 328 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 RELBQ01201 579 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 TMEM14EPQ6UXP3 125 aa9.07□□□□□ -0.96
SHC4-201ENST00000332408 OR11H12B2RN74 326 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 SRSF4Q08170 494 aaKnown RBP9.06□□□□□ -0.96
SHC4-201ENST00000332408 C11orf42Q8N5U0 333 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 CARHSP1Q9Y2V2 147 aaKnown RBP9.06□□□□□ -0.96
SHC4-201ENST00000332408 TRAV34A0A0B4J273 112 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 FCER1GP30273 86 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 TSPOP30536 169 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 C2orf83Q53S99 150 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 ZNF343Q6P1L6 599 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 SPTBN5Q9NRC6 3674 aaKnown RBP9.06□□□□□ -0.96
SHC4-201ENST00000332408 MGPP08493 103 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 TCF23Q7RTU1 214 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 SFRP2Q96HF1 295 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 ZNF702PQ9H963 129 aa9.06□□□□□ -0.96
SHC4-201ENST00000332408 RAI1Q7Z5J4 1906 aaPredicted RBP9.06□□□□□ -0.96
SHC4-201ENST00000332408 EIF4E3Q8N5X7 224 aaKnown RBP9.05□□□□□ -0.96
SHC4-201ENST00000332408 ST6GALNAC6Q969X2 333 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 GPR82Q96P67 336 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.05□□□□□ -0.96
SHC4-201ENST00000332408 SCO2A0A1W2PP80 73 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 NDUFA3O95167 84 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 EBI3Q14213 229 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 GCSAMLQ5JQS6 135 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 SAPCD1Q5SSQ6 148 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 RNF125Q96EQ8 232 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 TWIST1Q15672 202 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 TGIF2-C20orf24A0A0A6YYL0 155 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 HLA-DQA1P01909 254 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 C1orf229Q6ZS94 237 aaPredicted RBP9.05□□□□□ -0.96
SHC4-201ENST00000332408 DYNAPQ8N1N2 210 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 TTC9CQ8N5M4 171 aa9.05□□□□□ -0.96
SHC4-201ENST00000332408 MGAQ8IWI9 3026 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 A0A096LNT2 108 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 FOXI3A8MTJ6 420 aaPredicted RBP9.04□□□□□ -0.96
SHC4-201ENST00000332408 PEX7O00628 323 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 PRSS1P07477 247 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 PACRGQ96M98 296 aaPredicted RBP9.04□□□□□ -0.96
SHC4-201ENST00000332408 GGTLC1Q9BX51 225 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 MRPL27Q9P0M9 148 aaKnown RBP9.04□□□□□ -0.96
SHC4-201ENST00000332408 IGHG4P01861 327 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 GPX1P07203 203 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 HOXD3P31249 432 aaPredicted RBP9.04□□□□□ -0.96
SHC4-201ENST00000332408 APOC4P55056 127 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 SMAD5-AS1Q9Y6J3 95 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 CD81P60033 236 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 CCL20P78556 96 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 VSIRQ9H7M9 311 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 BPTFQ12830 3046 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 HIST1H1AQ02539 215 aaPredicted RBP9.04□□□□□ -0.96
SHC4-201ENST00000332408 SMUG1Q53HV7 270 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 TCF24Q7RTU0 167 aa9.04□□□□□ -0.96
SHC4-201ENST00000332408 RPS20P60866 119 aaKnown RBP9.03□□□□□ -0.96
SHC4-201ENST00000332408 LEMD1Q68G75 181 aa9.03□□□□□ -0.96
SHC4-201ENST00000332408 FAM53AQ6NSI3 398 aaPredicted RBP9.03□□□□□ -0.96
SHC4-201ENST00000332408 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
SHC4-201ENST00000332408 DDB2Q92466 427 aa9.03□□□□□ -0.96
SHC4-201ENST00000332408 AGMATQ9BSE5 352 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms